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  5. Sobic.004G144200.1

Sobic.004G144200.1


Description : Unknown function


Gene families : OG_42_0000301 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G144200.1
Cluster HCAA Clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
At3g44540 No alias Probable fatty acyl-CoA reductase 4... 0.03 Orthogroups_2024-Update
Bradi4g37862 No alias fatty acid reductase 1 0.08 Orthogroups_2024-Update
PSME_00008784-RA No alias (at3g44540 : 392.0) Encodes a member of the eight-member... 0.03 Orthogroups_2024-Update
PSME_00015276-RA No alias (at3g44540 : 403.0) Encodes a member of the eight-member... 0.02 Orthogroups_2024-Update
PSME_00019002-RA No alias (at3g44540 : 395.0) Encodes a member of the eight-member... 0.02 Orthogroups_2024-Update
PSME_00030498-RA No alias (at3g44540 : 380.0) Encodes a member of the eight-member... 0.02 Orthogroups_2024-Update
Potri.004G185000 No alias Jojoba acyl CoA reductase-related male sterility protein 0.02 Orthogroups_2024-Update
Potri.019G075200 No alias fatty acid reductase 4 0.02 Orthogroups_2024-Update
Potri.019G075300 No alias fatty acid reductase 4 0.02 Orthogroups_2024-Update
Pp1s31_174V6 No alias male sterility protein 2 0.03 Orthogroups_2024-Update
Sopen06g030880 No alias Male sterility protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR013120 Male_sterile_NAD-bd 117 400
No external refs found!