1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.004G147800.2

Sobic.004G147800.2


Description : phosphoinositide signalling effector *(ROF) & peptidyl-prolyl cis-trans isomerase *(ROF)


Gene families : OG_42_0001471 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001471_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G147800.2
Cluster HCAA Clusters: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
Bradi3g40890 No alias rotamase FKBP 1 0.03 Orthogroups_2024-Update
Glyma.03G086200 No alias rotamase FKBP 1 0.04 Orthogroups_2024-Update
Glyma.05G149900 No alias FKBP-type peptidyl-prolyl cis-trans isomerase family protein 0.03 Orthogroups_2024-Update
Glyma.16G088000 No alias rotamase FKBP 1 0.03 Orthogroups_2024-Update
HORVU2Hr1G067750.3 No alias phosphoinositide signalling effector *(ROF) &... 0.04 Orthogroups_2024-Update
HORVU7Hr1G053170.6 No alias phosphoinositide signalling effector *(ROF) &... 0.02 Orthogroups_2024-Update
MA_19406g0010 No alias (q43207|fkb70_wheat : 719.0) 70 kDa peptidyl-prolyl... 0.02 Orthogroups_2024-Update
Mp1g19650.1 No alias protein folding catalyst (FKBP) 0.02 Orthogroups_2024-Update
PSME_00001055-RA No alias (q43207|fkb70_wheat : 764.0) 70 kDa peptidyl-prolyl... 0.02 Orthogroups_2024-Update
Pp1s144_81V6 No alias peptidyl-prolyl isomerase 0.03 Orthogroups_2024-Update
Seita.6G218800.1 No alias phosphoinositide signalling effector *(ROF) &... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001440 TPR_1 542 575
IPR001179 PPIase_FKBP_dom 228 317
IPR001179 PPIase_FKBP_dom 113 201
IPR001179 PPIase_FKBP_dom 346 438
No external refs found!