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  5. Sobic.004G148000.1

Sobic.004G148000.1


Description : Unknown function


Gene families : OG_42_0000022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G148000.1
Cluster HCAA Clusters: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
109767 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update
227274 No alias Function unknown 0.04 Orthogroups_2024-Update
229376 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
270502 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
444186 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
446428 No alias RmlC-like cupins superfamily protein 0.04 Orthogroups_2024-Update
92738 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
A4A49_29884 No alias auxin-binding protein abp19a 0.03 Orthogroups_2024-Update
Brara.G01448.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.16G061400 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G066330.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU4Hr1G090190.4 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00052809-RA No alias (at5g20630 : 236.0) Encodes a germin-like protein. Its... 0.03 Orthogroups_2024-Update
PSME_00055631-RA No alias (at4g14630 : 229.0) germin-like protein with N-terminal... 0.03 Orthogroups_2024-Update
Potri.002G184900 No alias germin-like protein 10 0.02 Orthogroups_2024-Update
Sobic.006G217100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G067600.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sopen01g035090 No alias Cupin 0.03 Orthogroups_2024-Update
Sopen09g032950 No alias Cupin 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006045 Cupin_1 64 210
No external refs found!