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  5. Sobic.004G148200.1

Sobic.004G148200.1


Description : Unknown function


Gene families : OG_42_0000022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G148200.1
Cluster HCAA Clusters: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
At1g74820 No alias Germin-like protein subfamily T member 3... 0.02 Orthogroups_2024-Update
Bradi5g21910 No alias RmlC-like cupins superfamily protein 0.04 Orthogroups_2024-Update
Brara.I04761.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Kfl00516_0050 kfl00516_0050_v1.1 no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Kfl00516_0055 kfl00516_0055_v1.1 no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Mp6g03890.1 No alias Germin-like protein subfamily 3 member 2 OS=Arabidopsis... 0.05 Orthogroups_2024-Update
Mp6g16610.1 No alias Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.03 Orthogroups_2024-Update
PSME_00030115-RA No alias (at1g09560 : 257.0) germin-like protein (GLP5);... 0.03 Orthogroups_2024-Update
Potri.009G140400 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Potri.011G163800 No alias RmlC-like cupins superfamily protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004834 tryptophan synthase activity IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006045 Cupin_1 63 208
No external refs found!