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  5. Sobic.004G158901.1

Sobic.004G158901.1


Description : subgroup ERF-X transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G158901.1
Cluster HCAA Clusters: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
A4A49_02884 No alias ethylene-responsive transcription factor 14 0.02 Orthogroups_2024-Update
A4A49_03112 No alias ethylene-responsive transcription factor crf4 0.02 Orthogroups_2024-Update
A4A49_06467 No alias ethylene-responsive transcription factor crf4 0.03 Orthogroups_2024-Update
A4A49_16579 No alias ethylene-responsive transcription factor abr1 0.02 Orthogroups_2024-Update
A4A49_20188 No alias ethylene-responsive transcription factor erf062 0.02 Orthogroups_2024-Update
A4A49_20472 No alias ethylene-responsive transcription factor 13 0.02 Orthogroups_2024-Update
A4A49_20932 No alias ethylene-responsive transcription factor erf114 0.04 Orthogroups_2024-Update
A4A49_24642 No alias ethylene-responsive transcription factor rap2-11 0.02 Orthogroups_2024-Update
A4A49_33000 No alias ethylene-responsive transcription factor 14 0.02 Orthogroups_2024-Update
A4A49_34891 No alias dehydration-responsive element-binding protein 3 0.03 Orthogroups_2024-Update
A4A49_42290 No alias ethylene-responsive transcription factor rap2-4 0.02 Orthogroups_2024-Update
AC187157.4_FG001 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
At1g28360 No alias Ethylene-responsive transcription factor 12... 0.02 Orthogroups_2024-Update
At1g64380 No alias Ethylene-responsive transcription factor ERF061... 0.03 Orthogroups_2024-Update
Bradi1g54450 No alias related to AP2 11 0.02 Orthogroups_2024-Update
Bradi3g50630 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g51630 No alias C-repeat/DRE binding factor 2 0.02 Orthogroups_2024-Update
Brara.A03156.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Brara.F03560.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.H01375.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I00861.1 No alias subgroup ERF-II-DEAR transcription factor 0.03 Orthogroups_2024-Update
Brara.J02251.1 No alias cutin and suberin biosynthesis transcription factor... 0.04 Orthogroups_2024-Update
Brara.J02507.1 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
Cre14.g620500 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G053503 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G057386 No alias ethylene responsive element binding factor 5 0.03 Orthogroups_2024-Update
GRMZM2G421033 No alias DREB and EAR motif protein 3 0.03 Orthogroups_2024-Update
GRMZM2G434203 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G261700 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.03G017300 No alias related to AP2 11 0.02 Orthogroups_2024-Update
Glyma.03G138900 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G015900 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Glyma.06G163700 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.07G017300 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G031200 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G250100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G216600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G072000 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.10G036700 No alias ethylene response factor 1 0.04 Orthogroups_2024-Update
Glyma.11G053600 No alias DREB and EAR motif protein 2 0.03 Orthogroups_2024-Update
Glyma.11G199300 No alias cytokinin response factor 4 0.05 Orthogroups_2024-Update
Glyma.13G236500 No alias erf domain protein 9 0.03 Orthogroups_2024-Update
Glyma.16G040000 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.17G194100 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.19G035500 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os04g52090 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g07700 No alias AP2 domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os09g39850 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10431882g0010 No alias (at1g19210 : 119.0) encodes a member of the DREB... 0.05 Orthogroups_2024-Update
MA_10433094g0010 No alias (at1g74930 : 123.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_108992g0010 No alias (at1g74930 : 121.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_116185g0010 No alias (at5g61600 : 90.9) encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
MA_175747g0010 No alias (at1g74930 : 119.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_184464g0010 No alias (at4g17500 : 88.2) Encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
MA_201698g0010 No alias (at5g11590 : 124.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_2446g0010 No alias (at2g20880 : 136.0) Integrase-type DNA-binding... 0.02 Orthogroups_2024-Update
MA_426919g0010 No alias (at1g19210 : 109.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_54341g0010 No alias (at1g15360 : 131.0) Encodes a member of the ERF... 0.02 Orthogroups_2024-Update
MA_7166g0010 No alias (at3g60490 : 102.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_8552524g0010 No alias (q9lw50|erf2_nicsy : 135.0) Ethylene-responsive... 0.03 Orthogroups_2024-Update
MA_891091g0010 No alias (at4g17500 : 92.0) Encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
MA_98464g0010 No alias (at1g78080 : 107.0) Encodes a member of the DREB... 0.02 Orthogroups_2024-Update
Mp1g20040.1 No alias transcription factor (ERF) 0.02 Orthogroups_2024-Update
PSME_00005184-RA No alias (q40479|erf2_tobac : 141.0) Ethylene-responsive... 0.03 Orthogroups_2024-Update
PSME_00005185-RA No alias (at4g17500 : 105.0) Encodes a member of the ERF... 0.05 Orthogroups_2024-Update
PSME_00022516-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00037531-RA No alias (at5g61890 : 123.0) encodes a member of the ERF... 0.05 Orthogroups_2024-Update
PSME_00041851-RA No alias (at1g21910 : 102.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00050761-RA No alias (at1g15360 : 129.0) Encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00051454-RA No alias (at1g19210 : 98.6) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00051455-RA No alias (at5g21960 : 102.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
Potri.001G154200 No alias ethylene responsive element binding factor 5 0.02 Orthogroups_2024-Update
Potri.003G071666 No alias related to AP2 12 0.03 Orthogroups_2024-Update
Potri.003G161000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.003G220200 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Potri.005G233300 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G218200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.008G120100 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Potri.014G055700 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.019G067400 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.019G088000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Pp1s15_186V6 No alias transcriptional factor 0.05 Orthogroups_2024-Update
Pp1s340_16V6 No alias ethylene-responsive transcription 0.02 Orthogroups_2024-Update
Seita.1G187800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.1G259200.1 No alias subgroup ERF-III transcription factor 0.05 Orthogroups_2024-Update
Seita.2G138400.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Seita.2G156100.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Seita.3G192000.1 No alias subgroup ERF-VIII transcription factor 0.04 Orthogroups_2024-Update
Seita.3G291500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G051200.1 No alias subgroup ERF-V transcription factor 0.02 Orthogroups_2024-Update
Seita.5G320400.1 No alias subgroup ERF-IX transcription factor 0.04 Orthogroups_2024-Update
Seita.6G181700.1 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
Seita.7G188500.1 No alias subgroup ERF-III transcription factor 0.05 Orthogroups_2024-Update
Seita.9G516800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G350500.1 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.06 Orthogroups_2024-Update
Sobic.004G100500.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G171300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G168000.1 No alias subgroup ERF-IX transcription factor 0.04 Orthogroups_2024-Update
Sobic.007G188701.1 No alias subgroup ERF-X transcription factor 0.04 Orthogroups_2024-Update
Solyc03g026280 No alias CBF 0.03 Orthogroups_2024-Update
Sopen03g005150 No alias AP2 domain 0.05 Orthogroups_2024-Update
Sopen03g041270 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen06g019690 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 169 218
No external refs found!