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  5. Sobic.004G162400.1

Sobic.004G162400.1


Description : chaperone component *(ClpD) of chloroplast Clp-type protease complex


Gene families : OG_42_0000227 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G162400.1
Cluster HCAA Clusters: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
At2g25140 No alias Chaperone protein ClpB4, mitochondrial... 0.03 Orthogroups_2024-Update
Bradi1g10689 No alias heat shock protein 101 0.03 Orthogroups_2024-Update
Brara.G03189.1 No alias cytosolic chaperone *(Hsp101) 0.03 Orthogroups_2024-Update
Brara.J01953.1 No alias organellar chaperone *(Clp-p/Clp-m) 0.04 Orthogroups_2024-Update
Glyma.06G063202 No alias casein lytic proteinase B4 0.03 Orthogroups_2024-Update
HORVU1Hr1G068970.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU4Hr1G014120.2 No alias chaperone component *(ClpC) of chloroplast Clp-type... 0.03 Orthogroups_2024-Update
Potri.006G262700 No alias casein lytic proteinase B4 0.03 Orthogroups_2024-Update
Seita.1G177700.1 No alias chaperone component *(ClpD) of chloroplast Clp-type... 0.07 Orthogroups_2024-Update
Seita.3G175700.1 No alias cytosolic chaperone *(Hsp101) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
MF GO:0016887 ATPase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0002682 regulation of immune system process IEP Predicted GO
BP GO:0002831 regulation of response to biotic stimulus IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009092 homoserine metabolic process IEP Predicted GO
BP GO:0010112 regulation of systemic acquired resistance IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019346 transsulfuration IEP Predicted GO
BP GO:0031347 regulation of defense response IEP Predicted GO
BP GO:0032101 regulation of response to external stimulus IEP Predicted GO
BP GO:0043900 regulation of multi-organism process IEP Predicted GO
BP GO:0045088 regulation of innate immune response IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
BP GO:0046434 organophosphate catabolic process IEP Predicted GO
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0050667 homocysteine metabolic process IEP Predicted GO
BP GO:0050776 regulation of immune response IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR019489 Clp_ATPase_C 850 928
IPR004176 Clp_N 187 228
IPR004176 Clp_N 98 141
IPR003959 ATPase_AAA_core 322 438
IPR003959 ATPase_AAA_core 670 843
No external refs found!