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  5. Sobic.004G192400.2

Sobic.004G192400.2


Description : substrate adaptor of SCF E3 ubiquitin ligase *(SLY)


Gene families : OG_42_0002089 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002089_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G192400.2
Cluster HCAA Clusters: Cluster_405

Target Alias Description ECC score Gene Family Method Actions
Brara.A01426.1 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) 0.02 Orthogroups_2024-Update
HORVU4Hr1G071100.2 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) 0.04 Orthogroups_2024-Update
Potri.014G022100 No alias F-box family protein 0.02 Orthogroups_2024-Update
Solyc05g040040 No alias F-box family protein (AHRD V3.3 *** AT5G48170.1) 0.06 Orthogroups_2024-Update
Solyc07g047680 No alias F-box family protein (AHRD V3.3 *** AT5G48170.1) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 123 161
No external refs found!