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  5. Sobic.004G201400.1

Sobic.004G201400.1


Description : Unknown function


Gene families : OG_42_0000570 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000570_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G201400.1
Cluster HCAA Clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G036564 No alias Ankyrin repeat family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G032190.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G021190.4 No alias Unknown function 0.05 Orthogroups_2024-Update
HORVU7Hr1G043950.7 No alias Unknown function 0.06 Orthogroups_2024-Update
LOC_Os06g19050 No alias embryogenesis transmembrane protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.014G050700 No alias Ankyrin repeat family protein 0.03 Orthogroups_2024-Update
Seita.2G124600.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Seita.4G128100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.4G128800.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR026961 PGG_dom 684 797
IPR026961 PGG_dom 344 453
IPR026961 PGG_dom 498 612
IPR026961 PGG_dom 177 284
IPR026961 PGG_dom 21 128
No external refs found!