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  5. Sobic.004G205600.1

Sobic.004G205600.1


Description : transcriptional co-activator *(BET/GTE)


Gene families : OG_42_0000275 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000275_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G205600.1
Cluster HCAA Clusters: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
Bradi3g14160 No alias bromodomain and extraterminal domain protein 9 0.03 Orthogroups_2024-Update
Brara.F03218.1 No alias transcriptional co-activator *(BET/GTE) 0.03 Orthogroups_2024-Update
GRMZM2G127299 No alias bromodomain and extraterminal domain protein 9 0.03 Orthogroups_2024-Update
Glyma.12G122100 No alias global transcription factor group E4 0.03 Orthogroups_2024-Update
HORVU7Hr1G074620.7 No alias transcriptional co-activator *(BET/GTE) 0.03 Orthogroups_2024-Update
Kfl00071_0290 kfl00071_0290_v1.1 (at5g46550 : 105.0) DNA-binding bromodomain-containing... 0.03 Orthogroups_2024-Update
LOC_Os06g04640 No alias bromodomain domain containing protein, expressed 0.03 Orthogroups_2024-Update
Potri.001G285700 No alias global transcription factor group E3 0.03 Orthogroups_2024-Update
Potri.011G077100 No alias bromodomain and extraterminal domain protein 9 0.02 Orthogroups_2024-Update
evm.model.contig_2143.3 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0000278 mitotic cell cycle IEP Predicted GO
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004181 metallocarboxypeptidase activity IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Predicted GO
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001487 Bromodomain 175 258
IPR027353 NET_dom 319 384
No external refs found!