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  5. Solyc03g096030

Solyc03g096030


Description : trichome birefringence-like protein (DUF828) (AHRD V3.3 *** AT3G55990.1)


Gene families : OG_42_0001869 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001869_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g096030
Cluster HCCA clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
A4A49_01321 No alias protein eskimo 1 0.03 Orthogroups_2024-Update
At2g40150 No alias Protein trichome birefringence-like 28... 0.03 Orthogroups_2024-Update
Bradi1g16610 No alias Plant protein of unknown function (DUF828) 0.02 Orthogroups_2024-Update
Bradi1g65530 No alias Plant protein of unknown function (DUF828) 0.04 Orthogroups_2024-Update
GRMZM2G411159 No alias Plant protein of unknown function (DUF828) 0.02 Orthogroups_2024-Update
GRMZM2G451325 No alias Plant protein of unknown function (DUF828) 0.02 Orthogroups_2024-Update
Potri.008G069900 No alias Plant protein of unknown function (DUF828) 0.03 Orthogroups_2024-Update
Potri.008G070200 No alias Plant protein of unknown function (DUF828) 0.02 Orthogroups_2024-Update
Potri.010G187300 No alias Plant protein of unknown function (DUF828) 0.03 Orthogroups_2024-Update
Potri.010G187600 No alias Plant protein of unknown function (DUF828) 0.05 Orthogroups_2024-Update
Sobic.001G406700.1 No alias xylan O-acetyltransferase *(XOAT) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0005666 RNA polymerase III complex IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006383 transcription by RNA polymerase III IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 122 174
IPR026057 PC-Esterase 176 464
No external refs found!