Sobic.004G209700.1

Description : FRS/FRF-type transcription factor

Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.004G209700.1
Cluster	HCAA Clusters: Cluster_140

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g06907	No alias	FAR1-related sequence 5	0.03	Orthogroups_2024-Update
Glyma.14G000400	No alias	FAR1-related sequence 5	0.03	Orthogroups_2024-Update
Potri.001G201600	No alias	FAR1-related sequence 6	0.03	Orthogroups_2024-Update
Potri.006G020600	No alias	FRS (FAR1 Related Sequences) transcription factor family	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	16Dec
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	Predicted GO
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR004330	FAR1_DNA_bnd_dom	53	136
IPR018289	MULE_transposase_dom	256	349
IPR007527	Znf_SWIM	550	572

External Links

No external refs found!