Sobic.004G212400.2

Description : nucleotide exchange factor *(CGE)

Gene families : OG_42_0003002 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003002_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.004G212400.2
Cluster	HCAA Clusters: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
At5g17710	No alias	GrpE protein homolog [Source:UniProtKB/TrEMBL;Acc:A0A178U8H4]	0.02	Orthogroups_2024-Update
Bradi3g48540	No alias	Co-chaperone GrpE family protein	0.03	Orthogroups_2024-Update
Brara.B00728.1	No alias	nucleotide exchange factor *(CGE)	0.03	Orthogroups_2024-Update
Brara.H00599.1	No alias	nucleotide exchange factor *(CGE)	0.04	Orthogroups_2024-Update
Brara.J01784.1	No alias	nucleotide exchange factor *(CGE)	0.09	Orthogroups_2024-Update
GRMZM2G036590	No alias	Co-chaperone GrpE family protein	0.06	Orthogroups_2024-Update
Glyma.19G120100	No alias	Co-chaperone GrpE family protein	0.03	Orthogroups_2024-Update
Potri.013G067900	No alias	Co-chaperone GrpE family protein	0.03	Orthogroups_2024-Update
Seita.1G230200.1	No alias	nucleotide exchange factor *(CGE)	0.06	Orthogroups_2024-Update
Sobic.006G082500.1	No alias	nucleotide exchange factor *(CGE)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEA	16Dec
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006457	protein folding	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IEA	16Dec
MF	GO:0046983	protein dimerization activity	None	Extended
MF	GO:0051087	chaperone binding	IEA	16Dec
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
MF	GO:0060590	ATPase regulator activity	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0001882	nucleoside binding	IEP	Predicted GO
MF	GO:0001883	purine nucleoside binding	IEP	Predicted GO
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003690	double-stranded DNA binding	IEP	Predicted GO
MF	GO:0003916	DNA topoisomerase activity	IEP	Predicted GO
MF	GO:0005525	GTP binding	IEP	Predicted GO
CC	GO:0005694	chromosome	IEP	Predicted GO
BP	GO:0006265	DNA topological change	IEP	Predicted GO
BP	GO:0006353	DNA-templated transcription, termination	IEP	Predicted GO
MF	GO:0008173	RNA methyltransferase activity	IEP	Predicted GO
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predicted GO
MF	GO:0019001	guanyl nucleotide binding	IEP	Predicted GO
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predicted GO
MF	GO:0032549	ribonucleoside binding	IEP	Predicted GO
MF	GO:0032550	purine ribonucleoside binding	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
MF	GO:0043015	gamma-tubulin binding	IEP	Predicted GO
BP	GO:0071103	DNA conformation change	IEP	Predicted GO
MF	GO:0097367	carbohydrate derivative binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000740	GrpE	60	215

External Links

No external refs found!