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  5. Sobic.004G213500.1

Sobic.004G213500.1


Description : xylogalacturonan xylosyltransferase


Gene families : OG_42_0000193 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G213500.1
Cluster HCAA Clusters: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
172637 No alias Exostosin family protein 0.04 Orthogroups_2024-Update
Bradi2g44880 No alias Exostosin family protein 0.04 Orthogroups_2024-Update
Brara.F02762.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.04G083800 No alias Exostosin family protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G057000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G028630.2 No alias xylogalacturonan xylosyltransferase 0.04 Orthogroups_2024-Update
PSME_00046613-RA No alias (at4g16745 : 470.0) Exostosin family protein; FUNCTIONS... 0.02 Orthogroups_2024-Update
PSME_00048991-RA No alias (at4g16745 : 356.0) Exostosin family protein; FUNCTIONS... 0.02 Orthogroups_2024-Update
Potri.018G085500 No alias Exostosin family protein 0.03 Orthogroups_2024-Update
Solyc01g056790 No alias Exostosin-like protein (AHRD V3.3 *** A0A124SBF9_CYNCS) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!