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  5. Sobic.004G215700.1

Sobic.004G215700.1


Description : Ran-activating protein of nucleocytoplasmic transport


Gene families : OG_42_0001506 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001506_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G215700.1
Cluster HCAA Clusters: Cluster_432

Target Alias Description ECC score Gene Family Method Actions
Brara.E03319.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.20G143300 No alias RAN GTPase activating protein 2 0.03 Orthogroups_2024-Update
Solyc01g079680 No alias Ran GTPase activating protein 2 (AHRD V3.3 *** I7JP53_9SOLN) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025265 WPP_dom 13 107
IPR001611 Leu-rich_rpt 216 235
IPR001611 Leu-rich_rpt 324 346
No external refs found!