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At3g55840


Description : Nematode resistance protein-like HSPRO1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LY61]


Gene families : OG_42_0004516 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004516_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g55840
Cluster HCCA clusters: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Brara.C02045.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.D02425.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.11G228100 No alias ortholog of sugar beet HS1 PRO-1 2 0.04 Orthogroups_2024-Update
Pp1s28_254V6 No alias contains ESTs AU056303(S20457),AU056302(S20457) [Oryza... 0.03 Orthogroups_2024-Update
Pp1s389_27V6 No alias contains ESTs AU056303(S20457),AU056302(S20457) [Oryza... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006952 defense response IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR009743 Hs1pro-1_C 168 427
IPR009869 HSPRO1_N 1 165
No external refs found!