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  5. Sobic.004G220700.1

Sobic.004G220700.1


Description : phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase


Gene families : OG_42_0000392 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G220700.1
Cluster HCAA Clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
A4A49_26864 No alias phenylalanine ammonia-lyase 0.05 Orthogroups_2024-Update
A4A49_27559 No alias phenylalanine ammonia-lyase 0.06 Orthogroups_2024-Update
At3g53260 No alias Phenylalanine ammonia-lyase 2... 0.05 Orthogroups_2024-Update
Bradi3g49260 No alias PHE ammonia lyase 1 0.03 Orthogroups_2024-Update
Bradi5g15830 No alias PHE ammonia lyase 1 0.09 Orthogroups_2024-Update
Brara.B00136.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G081582 No alias PHE ammonia lyase 1 0.03 Orthogroups_2024-Update
Glyma.02G309300 No alias PHE ammonia lyase 1 0.03 Orthogroups_2024-Update
Glyma.10G058200 No alias PHE ammonia lyase 1 0.02 Orthogroups_2024-Update
Glyma.19G182300 No alias PHE ammonia lyase 1 0.06 Orthogroups_2024-Update
Glyma.20G180800 No alias phenylalanine ammonia-lyase 2 0.07 Orthogroups_2024-Update
HORVU0Hr1G016330.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
HORVU2Hr1G038140.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
HORVU2Hr1G089440.4 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.05 Orthogroups_2024-Update
HORVU2Hr1G089540.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.06 Orthogroups_2024-Update
HORVU6Hr1G058840.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.06 Orthogroups_2024-Update
LOC_Os04g43760 No alias phenylalanine ammonia-lyase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g33610 No alias phenylalanine ammonia-lyase, putative, expressed 0.03 Orthogroups_2024-Update
MA_123220g0010 No alias (p24481|pal1_petcr : 912.0) Phenylalanine ammonia-lyase... 0.03 Orthogroups_2024-Update
MA_44561g0010 No alias (p45729|pal3_petcr : 870.0) Phenylalanine ammonia-lyase... 0.04 Orthogroups_2024-Update
MA_73113g0010 No alias (p45733|pal3_tobac : 734.0) Phenylalanine ammonia-lyase... 0.03 Orthogroups_2024-Update
Pp1s22_3V6 No alias phenylalanine ammonia-lyase 0.03 Orthogroups_2024-Update
Pp1s500_4V6 No alias phenylalanine ammonia-lyase 0.03 Orthogroups_2024-Update
Pp1s52_44V6 No alias phenylalanine ammonia-lyase 0.02 Orthogroups_2024-Update
Seita.1G240200.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.05 Orthogroups_2024-Update
Seita.1G240300.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.04 Orthogroups_2024-Update
Seita.1G240500.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
Seita.1G240600.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.02 Orthogroups_2024-Update
Seita.6G181000.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
Seita.7G168700.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.06 Orthogroups_2024-Update
Sobic.004G220500.1 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
Sobic.004G220600.2 No alias phenylalanine ammonia lyase *(PAL) & EC_4.3 carbon-nitrogen lyase 0.02 Orthogroups_2024-Update
Solyc10g011920 No alias Phenylalanine ammonia-lyase (AHRD V3.3 *** A0A124SBF6_CYNCS) 0.02 Orthogroups_2024-Update
Solyc10g086180 No alias Phenylalanine ammonia-lyase (AHRD V3.3 *** PAL2_TOBAC) 0.04 Orthogroups_2024-Update
Sopen05g034580 No alias Aromatic amino acid lyase 0.04 Orthogroups_2024-Update
Sopen09g002740 No alias Aromatic amino acid lyase 0.02 Orthogroups_2024-Update
Sopen10g035560 No alias Aromatic amino acid lyase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 62 528
No external refs found!