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  5. Sobic.004G225400.1

Sobic.004G225400.1


Description : circadian clock repression factor *(CHE) & TCP-type transcription factor


Gene families : OG_42_0000261 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G225400.1

Target Alias Description ECC score Gene Family Method Actions
At1g69690 No alias TCP15 [Source:UniProtKB/TrEMBL;Acc:A0A178WLV7] 0.02 Orthogroups_2024-Update
At3g27010 No alias TCP20 [Source:UniProtKB/TrEMBL;Acc:A0A178VAT1] 0.02 Orthogroups_2024-Update
Brara.B00281.1 No alias circadian clock repression factor *(CHE) & TCP-type... 0.02 Orthogroups_2024-Update
Glyma.09G284500 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
LOC_Os12g07480 No alias TCP family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
Mp7g09490.1 No alias transcription factor (TCP) 0.02 Orthogroups_2024-Update
Sobic.006G154000.1 No alias TCP-type transcription factor 0.04 Orthogroups_2024-Update
Sopen05g003300 No alias TCP family transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 56 141
No external refs found!