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  5. Sobic.004G227400.2

Sobic.004G227400.2


Description : subgroup ERF-I transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G227400.2
Cluster HCAA Clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
A4A49_03112 No alias ethylene-responsive transcription factor crf4 0.03 Orthogroups_2024-Update
A4A49_03202 No alias ethylene-responsive transcription factor erf053 0.02 Orthogroups_2024-Update
A4A49_13998 No alias ethylene-responsive transcription factor 4 0.03 Orthogroups_2024-Update
A4A49_16244 No alias ethylene-responsive transcription factor rap2-11 0.02 Orthogroups_2024-Update
A4A49_16759 No alias ethylene-responsive transcription factor erf012 0.03 Orthogroups_2024-Update
A4A49_18156 No alias ethylene-responsive transcription factor shine 3 0.04 Orthogroups_2024-Update
A4A49_20188 No alias ethylene-responsive transcription factor erf062 0.03 Orthogroups_2024-Update
A4A49_20932 No alias ethylene-responsive transcription factor erf114 0.03 Orthogroups_2024-Update
A4A49_24642 No alias ethylene-responsive transcription factor rap2-11 0.03 Orthogroups_2024-Update
A4A49_25134 No alias ethylene-responsive transcription factor 1b 0.03 Orthogroups_2024-Update
A4A49_28228 No alias ethylene-responsive transcription factor erf017 0.03 Orthogroups_2024-Update
A4A49_30015 No alias ethylene-responsive transcription factor erf019 0.02 Orthogroups_2024-Update
A4A49_33000 No alias ethylene-responsive transcription factor 14 0.03 Orthogroups_2024-Update
A4A49_34891 No alias dehydration-responsive element-binding protein 3 0.03 Orthogroups_2024-Update
A4A49_40092 No alias ethylene-responsive transcription factor crf2 0.03 Orthogroups_2024-Update
A4A49_42088 No alias ethylene-responsive transcription factor 13 0.03 Orthogroups_2024-Update
A4A49_42272 No alias ethylene-responsive transcription factor 4 0.04 Orthogroups_2024-Update
A4A49_42290 No alias ethylene-responsive transcription factor rap2-4 0.03 Orthogroups_2024-Update
AC187157.4_FG001 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
AC198403.3_FG001 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
At1g22190 No alias Ethylene-responsive transcription factor RAP2-13... 0.05 Orthogroups_2024-Update
At1g28360 No alias Ethylene-responsive transcription factor 12... 0.02 Orthogroups_2024-Update
At1g28370 No alias ERF domain protein 11 [Source:TAIR;Acc:AT1G28370] 0.02 Orthogroups_2024-Update
At1g71450 No alias Ethylene-responsive transcription factor ERF021... 0.03 Orthogroups_2024-Update
At2g23340 No alias Ethylene-responsive transcription factor ERF008... 0.02 Orthogroups_2024-Update
At3g11020 No alias Dehydration-responsive element-binding protein 2B... 0.02 Orthogroups_2024-Update
At3g16770 No alias Ethylene-responsive transcription factor RAP2-3... 0.03 Orthogroups_2024-Update
At3g25890 No alias Ethylene-responsive transcription factor ERF119... 0.03 Orthogroups_2024-Update
At4g11140 No alias Ethylene-responsive transcription factor CRF1... 0.06 Orthogroups_2024-Update
At4g25480 No alias Dehydration-responsive element-binding protein 1A... 0.03 Orthogroups_2024-Update
At4g39780 No alias Ethylene-responsive transcription factor ERF060... 0.03 Orthogroups_2024-Update
At5g25190 No alias Ethylene-responsive transcription factor ERF003... 0.03 Orthogroups_2024-Update
At5g51190 No alias Ethylene-responsive transcription factor ERF105... 0.03 Orthogroups_2024-Update
At5g51990 No alias C-repeat binding factor 4 [Source:UniProtKB/TrEMBL;Acc:B2BJ26] 0.05 Orthogroups_2024-Update
Bradi1g54450 No alias related to AP2 11 0.05 Orthogroups_2024-Update
Bradi4g29010 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Bradi5g24110 No alias related to AP2 10 0.04 Orthogroups_2024-Update
Brara.A00159.1 No alias subgroup ERF-II-DEAR transcription factor 0.03 Orthogroups_2024-Update
Brara.A01860.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Brara.A02664.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.B00174.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.02 Orthogroups_2024-Update
Brara.B01799.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.03 Orthogroups_2024-Update
Brara.B02302.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Brara.B03764.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.D01564.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Brara.D02156.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Brara.E00876.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Brara.F02721.1 No alias subgroup ERF-V transcription factor 0.03 Orthogroups_2024-Update
Brara.F03559.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Brara.G00520.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.G00521.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.G03053.1 No alias subgroup ERF-II transcription factor *(ERF19/20) 0.03 Orthogroups_2024-Update
Brara.H01575.1 No alias transcription factor *(CBF/DREB1) & subgroup ERF-III... 0.02 Orthogroups_2024-Update
Brara.H01995.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Brara.H02380.1 No alias subgroup ERF-II transcription factor *(ERF16/17/18) 0.03 Orthogroups_2024-Update
Brara.I00546.1 No alias cutin and suberin biosynthesis transcription factor... 0.03 Orthogroups_2024-Update
Brara.I00861.1 No alias subgroup ERF-II-DEAR transcription factor 0.03 Orthogroups_2024-Update
Brara.I01208.1 No alias subgroup ERF-III transcription factor 0.04 Orthogroups_2024-Update
Brara.I01326.1 No alias subgroup ERF-I transcription factor 0.04 Orthogroups_2024-Update
Brara.I01983.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.J02216.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Brara.K00687.1 No alias subgroup ERF-III transcription factor 0.05 Orthogroups_2024-Update
Brara.K01035.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Brara.K01713.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Cre14.g620500 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G003466 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G053503 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G084264 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G137341 No alias C-repeat/DRE binding factor 2 0.04 Orthogroups_2024-Update
GRMZM2G169382 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G380377 No alias dehydration response element B1A 0.04 Orthogroups_2024-Update
GRMZM2G421033 No alias DREB and EAR motif protein 3 0.02 Orthogroups_2024-Update
GRMZM2G434203 No alias Integrase-type DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
Glyma.02G039300 No alias DORNROSCHEN-like 0.02 Orthogroups_2024-Update
Glyma.03G017300 No alias related to AP2 11 0.04 Orthogroups_2024-Update
Glyma.06G163700 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G114000 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Glyma.07G250100 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.08G145300 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.08G216600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G118900 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G194200 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G053600 No alias DREB and EAR motif protein 2 0.05 Orthogroups_2024-Update
Glyma.11G199300 No alias cytokinin response factor 4 0.04 Orthogroups_2024-Update
Glyma.13G081600 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.14G057900 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G040000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G024300 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.18G252300 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Glyma.20G070100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G195900 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G098330.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU4Hr1G079630.1 No alias subgroup ERF-IX transcription factor 0.04 Orthogroups_2024-Update
HORVU6Hr1G050500.2 No alias subgroup ERF-IV/DREB2 transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G062380.3 No alias subgroup ERF-IX transcription factor 0.04 Orthogroups_2024-Update
LOC_Os02g34260 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g38090 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g43790 No alias ethylene-responsive transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g43940 No alias AP2 domain containing protein, expressed 0.05 Orthogroups_2024-Update
LOC_Os02g43970 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g51670 No alias ethylene-responsive transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g52670 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g08460 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g32620 No alias ethylene-responsive transcription factor ERF114,... 0.02 Orthogroups_2024-Update
LOC_Os04g52090 No alias AP2 domain containing protein, expressed 0.04 Orthogroups_2024-Update
MA_100577g0010 No alias (at5g21960 : 112.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_184464g0010 No alias (at4g17500 : 88.2) Encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
MA_203191g0010 No alias (at1g28360 : 85.9) encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
MA_2446g0010 No alias (at2g20880 : 136.0) Integrase-type DNA-binding... 0.03 Orthogroups_2024-Update
MA_3405g0010 No alias (q40476|erf1_tobac : 120.0) Ethylene-responsive... 0.02 Orthogroups_2024-Update
MA_4032g0010 No alias (q9sxs8|erf3_tobac : 85.1) Ethylene-responsive... 0.03 Orthogroups_2024-Update
MA_426919g0010 No alias (at1g19210 : 109.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_67841g0010 No alias (at2g44940 : 151.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_7166g0010 No alias (at3g60490 : 102.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_83118g0010 No alias (at1g78080 : 90.5) Encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_900190g0010 No alias (at1g01250 : 124.0) encodes a member of the DREB... 0.04 Orthogroups_2024-Update
MA_938274g0010 No alias (at4g17500 : 97.8) Encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
Mp1g20040.1 No alias transcription factor (ERF) 0.02 Orthogroups_2024-Update
PSME_00004941-RA No alias (at4g17500 : 94.7) Encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
PSME_00005184-RA No alias (q40479|erf2_tobac : 141.0) Ethylene-responsive... 0.02 Orthogroups_2024-Update
PSME_00005185-RA No alias (at4g17500 : 105.0) Encodes a member of the ERF... 0.04 Orthogroups_2024-Update
PSME_00005186-RA No alias (at4g17500 : 141.0) Encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00008357-RA No alias (at5g21960 : 123.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
PSME_00037531-RA No alias (at5g61890 : 123.0) encodes a member of the ERF... 0.04 Orthogroups_2024-Update
PSME_00037533-RA No alias (at5g61890 : 108.0) encodes a member of the ERF... 0.04 Orthogroups_2024-Update
PSME_00040934-RA No alias (at5g64750 : 100.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00041322-RA No alias (q40476|erf1_tobac : 120.0) Ethylene-responsive... 0.02 Orthogroups_2024-Update
PSME_00041851-RA No alias (at1g21910 : 102.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00050761-RA No alias (at1g15360 : 129.0) Encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00051454-RA No alias (at1g19210 : 98.6) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00051455-RA No alias (at5g21960 : 102.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00051697-RA No alias (q40476|erf1_tobac : 102.0) Ethylene-responsive... 0.03 Orthogroups_2024-Update
PSME_00053842-RA No alias (at5g21960 : 117.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
Potri.001G004700 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Potri.001G079900 No alias ethylene responsive element binding factor 1 0.03 Orthogroups_2024-Update
Potri.002G124000 No alias related to AP2 1 0.04 Orthogroups_2024-Update
Potri.003G050700 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.003G080600 No alias ethylene responsive element binding factor 6 0.02 Orthogroups_2024-Update
Potri.003G220200 No alias related to AP2 11 0.02 Orthogroups_2024-Update
Potri.004G051800 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.004G187001 No alias C-repeat/DRE binding factor 2 0.03 Orthogroups_2024-Update
Potri.006G218200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.010G006800 No alias ethylene-responsive element binding protein 0.03 Orthogroups_2024-Update
Potri.011G061700 No alias ethylene response factor 1 0.04 Orthogroups_2024-Update
Potri.012G134000 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.014G025200 No alias related to AP2 1 0.02 Orthogroups_2024-Update
Potri.014G046800 No alias ethylene-responsive element binding factor 13 0.02 Orthogroups_2024-Update
Potri.015G023200 No alias cytokinin response factor 4 0.02 Orthogroups_2024-Update
Potri.016G126100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.017G055400 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.019G067400 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.019G131300 No alias cytokinin response factor 4 0.04 Orthogroups_2024-Update
Potri.T050600 No alias ethylene response factor 1 0.02 Orthogroups_2024-Update
Pp1s105_212V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s132_34V6 No alias transcriptional factor 0.03 Orthogroups_2024-Update
Pp1s136_219V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Pp1s15_186V6 No alias transcriptional factor 0.04 Orthogroups_2024-Update
Pp1s187_47V6 No alias dna binding 0.02 Orthogroups_2024-Update
Pp1s38_257V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s5_432V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.1G257300.1 No alias subgroup ERF-IX transcription factor 0.05 Orthogroups_2024-Update
Seita.1G330800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.1G341100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G138400.1 No alias subgroup ERF-IX transcription factor 0.04 Orthogroups_2024-Update
Seita.2G156200.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Seita.2G276200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G364700.1 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.04 Orthogroups_2024-Update
Seita.3G031600.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Seita.5G320400.1 No alias subgroup ERF-IX transcription factor 0.07 Orthogroups_2024-Update
Seita.9G320700.1 No alias subgroup ERF-IX transcription factor 0.06 Orthogroups_2024-Update
Seita.9G323300.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Seita.9G500100.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Seita.9G516500.1 No alias subgroup ERF-VII transcription factor 0.03 Orthogroups_2024-Update
Seita.9G516600.1 No alias subgroup ERF-VII transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G296300.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G473900.1 No alias subgroup ERF-I transcription factor 0.04 Orthogroups_2024-Update
Sobic.001G502300.1 No alias subgroup ERF-IX transcription factor 0.05 Orthogroups_2024-Update
Sobic.002G260800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.003G297600.1 No alias subgroup ERF-IX transcription factor 0.04 Orthogroups_2024-Update
Sobic.005G103000.1 No alias subgroup ERF-IX transcription factor 0.04 Orthogroups_2024-Update
Sobic.006G168000.1 No alias subgroup ERF-IX transcription factor 0.04 Orthogroups_2024-Update
Sobic.006G259000.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Solyc02g093130 No alias AP2/EREBP transcription factor_1 0.03 Orthogroups_2024-Update
Solyc03g093530 No alias ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc04g014530 No alias Ethylene Response Factor C.2 0.05 Orthogroups_2024-Update
Sopen02g035400 No alias AP2 domain 0.05 Orthogroups_2024-Update
Sopen02g037700 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen03g005150 No alias AP2 domain 0.04 Orthogroups_2024-Update
Sopen06g016040 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen07g027720 No alias AP2 domain 0.04 Orthogroups_2024-Update
Sopen08g026670 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 227 275
No external refs found!