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  5. Sobic.004G227900.1

Sobic.004G227900.1


Description : beta-class expansin


Gene families : OG_42_0000145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G227900.1
Cluster HCAA Clusters: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Bradi1g78350 No alias expansin B2 0.03 Orthogroups_2024-Update
Bradi3g33130 No alias expansin B2 0.02 Orthogroups_2024-Update
LOC_Os03g01270 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 176 257
IPR009009 RlpA-like_DPBB 84 161
No external refs found!