1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.004G228500.1

Sobic.004G228500.1


Description : Unknown function


Gene families : OG_42_0000026 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000026_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G228500.1
Cluster HCAA Clusters: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
A4A49_01264 No alias blue copper protein 0.03 Orthogroups_2024-Update
A4A49_40395 No alias blue copper protein 0.03 Orthogroups_2024-Update
Brara.B03593.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.E02426.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.F03225.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G107562 No alias Cupredoxin superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G414317 No alias Cupredoxin superfamily protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G122700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G073070.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G036390.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os03g44630 No alias plastocyanin-like domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00043823-RA No alias (at2g32300 : 116.0) Encodes a uclacyanin, a protein... 0.02 Orthogroups_2024-Update
PSME_00055509-RA No alias (at2g32300 : 114.0) Encodes a uclacyanin, a protein... 0.03 Orthogroups_2024-Update
Potri.002G052500 No alias Cupredoxin superfamily protein 0.02 Orthogroups_2024-Update
Potri.008G151000 No alias Cupredoxin superfamily protein 0.03 Orthogroups_2024-Update
Potri.013G030000 No alias uclacyanin 1 0.03 Orthogroups_2024-Update
Pp1s41_159V6 No alias blue copper protein 0.02 Orthogroups_2024-Update
Solyc10g081520 No alias Blue copper protein (AHRD V3.3 *** A0A0M4FTF3_9SOLA) 0.03 Orthogroups_2024-Update
Sopen07g026260 No alias Plastocyanin-like domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR003245 Phytocyanin_dom 37 118
No external refs found!