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  5. Sobic.004G234500.1

Sobic.004G234500.1


Description : A1-class (Pepsin) protease


Gene families : OG_42_0007130 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007130_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G234500.1
Cluster HCAA Clusters: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
HORVU6Hr1G075110.6 No alias A1-class (Pepsin) protease 0.05 Orthogroups_2024-Update
Sopen04g024310 No alias Xylanase inhibitor N-terminal 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
InterPro domains Description Start Stop
IPR032799 TAXi_C 318 441
IPR032861 TAXi_N 100 279
No external refs found!