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  5. Sobic.004G238600.1

Sobic.004G238600.1


Description : starch synthase *(SS2) & EC_2.4 glycosyltransferase


Gene families : OG_42_0003564 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003564_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G238600.1
Cluster HCAA Clusters: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Bradi1g45130 No alias starch synthase 2 0.02 Orthogroups_2024-Update
Bradi3g59440 No alias starch synthase 2 0.02 Orthogroups_2024-Update
Glyma.13G062700 No alias starch synthase 2 0.04 Orthogroups_2024-Update
LOC_Os02g51070 No alias starch synthase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g30156 No alias starch synthase, putative, expressed 0.03 Orthogroups_2024-Update
Potri.017G084100 No alias starch synthase 2 0.03 Orthogroups_2024-Update
Seita.1G318200.1 No alias starch synthase *(SS2) & EC_2.4 glycosyltransferase 0.08 Orthogroups_2024-Update
Seita.9G243600.1 No alias starch synthase *(SS2) & EC_2.4 glycosyltransferase 0.04 Orthogroups_2024-Update
Sopen02g032740 No alias Starch synthase catalytic domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016757 transferase activity, transferring glycosyl groups IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predicted GO
MF GO:0044183 protein binding involved in protein folding IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0110102 chloroplast ribulose bisphosphate carboxylase complex assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR001296 Glyco_trans_1 515 663
IPR013534 Starch_synth_cat_dom 214 456
No external refs found!