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  5. Sobic.004G244600.1

Sobic.004G244600.1


Description : Unknown function


Gene families : OG_42_0000077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G244600.1
Cluster HCAA Clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
A4A49_18847 No alias endoglucanase 6 0.03 Orthogroups_2024-Update
A4A49_24186 No alias endoglucanase 19 0.03 Orthogroups_2024-Update
At1g48930 No alias Endoglucanase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M995] 0.02 Orthogroups_2024-Update
Bradi1g35220 No alias glycosyl hydrolase 9B5 0.03 Orthogroups_2024-Update
Bradi3g04080 No alias glycosyl hydrolase 9B8 0.04 Orthogroups_2024-Update
Bradi3g57190 No alias glycosyl hydrolase 9A4 0.03 Orthogroups_2024-Update
Bradi3g59810 No alias glycosyl hydrolase 9B8 0.05 Orthogroups_2024-Update
Brara.G03044.1 No alias class-B endo-1,4-beta-glucanase 0.03 Orthogroups_2024-Update
Brara.I03254.1 No alias class-B endo-1,4-beta-glucanase 0.03 Orthogroups_2024-Update
Glyma.04G025000 No alias glycosyl hydrolase 9B7 0.02 Orthogroups_2024-Update
Glyma.05G236400 No alias glycosyl hydrolase 9B1 0.03 Orthogroups_2024-Update
HORVU5Hr1G098710.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os08g02220 No alias endoglucanase, putative, expressed 0.03 Orthogroups_2024-Update
MA_16152g0010 No alias (at4g02290 : 718.0) glycosyl hydrolase 9B13 (GH9B13);... 0.03 Orthogroups_2024-Update
MA_195523g0010 No alias (at3g43860 : 298.0) glycosyl hydrolase 9A4 (GH9A4);... 0.05 Orthogroups_2024-Update
PSME_00001650-RA No alias (at4g11050 : 540.0) glycosyl hydrolase 9C3 (GH9C3);... 0.03 Orthogroups_2024-Update
PSME_00006676-RA No alias (at4g02290 : 363.0) glycosyl hydrolase 9B13 (GH9B13);... 0.02 Orthogroups_2024-Update
PSME_00013360-RA No alias (at1g02800 : 658.0) Encodes a protein with similarity to... 0.03 Orthogroups_2024-Update
PSME_00016234-RA No alias (at1g70710 : 674.0) endo-1,4-beta-glucanase. Involved in... 0.03 Orthogroups_2024-Update
PSME_00024924-RA No alias (at4g02290 : 664.0) glycosyl hydrolase 9B13 (GH9B13);... 0.02 Orthogroups_2024-Update
PSME_00033700-RA No alias (at4g11050 : 728.0) glycosyl hydrolase 9C3 (GH9C3);... 0.04 Orthogroups_2024-Update
PSME_00042047-RA No alias (at1g02800 : 369.0) Encodes a protein with similarity to... 0.02 Orthogroups_2024-Update
Potri.001G092200 No alias glycosyl hydrolase 9C2 0.02 Orthogroups_2024-Update
Potri.001G098800 No alias glycosyl hydrolase 9B14 0.03 Orthogroups_2024-Update
Pp1s100_139V6 No alias endo-beta- -glucanase 0.02 Orthogroups_2024-Update
Seita.1G086900.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.1G314100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.3G050200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G148500.1 No alias class-B endo-1,4-beta-glucanase 0.03 Orthogroups_2024-Update
Sobic.004G021400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.006G090900.1 No alias class-B endo-1,4-beta-glucanase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 263 729
No external refs found!