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At3g56150


Description : Eukaryotic translation initiation factor 3 subunit C [Source:UniProtKB/Swiss-Prot;Acc:O49160]


Gene families : OG_42_0002950 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002950_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g56150
Cluster HCCA clusters: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
437467 No alias eukaryotic translation initiation factor 3C 0.02 Orthogroups_2024-Update
Bradi4g30730 No alias eukaryotic translation initiation factor 3C 0.06 Orthogroups_2024-Update
Bradi4g30780 No alias eukaryotic translation initiation factor 3C 0.05 Orthogroups_2024-Update
Bradi5g12910 No alias eukaryotic translation initiation factor 3C 0.06 Orthogroups_2024-Update
Cre04.g217550 No alias eukaryotic translation initiation factor 3C 0.04 Orthogroups_2024-Update
Glyma.03G206400 No alias eukaryotic translation initiation factor 3C 0.04 Orthogroups_2024-Update
HORVU5Hr1G063770.2 No alias component *(eIF3c) of eIF3 mRNA-to-PIC binding complex 0.03 Orthogroups_2024-Update
HORVU5Hr1G098600.2 No alias component *(eIF3c) of eIF3 mRNA-to-PIC binding complex 0.05 Orthogroups_2024-Update
MA_4671g0010 No alias (q9xhm1|if38_medtr : 712.0) Eukaryotic translation... 0.03 Orthogroups_2024-Update
Mp6g05320.1 No alias component eIF3c of eIF3 mRNA-to-PIC binding complex 0.02 Orthogroups_2024-Update
Pp1s140_60V6 No alias eukaryotic translation initiation factor 3 0.03 Orthogroups_2024-Update
Seita.2G253000.1 No alias component *(eIF3c) of eIF3 mRNA-to-PIC binding complex 0.06 Orthogroups_2024-Update
Sobic.002G246700.1 No alias component *(eIF3c) of eIF3 mRNA-to-PIC binding complex 0.03 Orthogroups_2024-Update
Sopen01g044990 No alias Eukaryotic translation initiation factor 3 subunit 8 N-terminus 0.03 Orthogroups_2024-Update
Sopen01g045010 No alias Eukaryotic translation initiation factor 3 subunit 8 N-terminus 0.03 Orthogroups_2024-Update
evm.model.tig00000842.12 No alias (at3g56150 : 460.0) member of eIF3c - eukaryotic... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA InterProScan predictions
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEA InterProScan predictions
BP GO:0006413 translational initiation IEA InterProScan predictions
MF GO:0031369 translation initiation factor binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0000469 cleavage involved in rRNA processing IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Predicted GO
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008905 EIF3C_N_dom 38 636
IPR000717 PCI_dom 644 773
No external refs found!