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  5. Sobic.004G246300.1

Sobic.004G246300.1


Description : Unknown function


Gene families : OG_42_0000543 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000543_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G246300.1
Cluster HCAA Clusters: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
Glyma.07G199800 No alias MAC/Perforin domain-containing protein 0.03 Orthogroups_2024-Update
Glyma.18G214700 No alias MAC/Perforin domain-containing protein 0.03 Orthogroups_2024-Update
PSME_00040187-RA No alias (at1g14780 : 519.0) MAC/Perforin domain-containing... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR020864 MACPF 99 315
No external refs found!