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  5. Sobic.004G246400.1

Sobic.004G246400.1


Description : Unknown function


Gene families : OG_42_0002271 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G246400.1
Cluster HCAA Clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
HORVU6Hr1G074220.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc03g114140 No alias RNA-dependent RNA polymerase2 0.03 Orthogroups_2024-Update
Sopen03g033200 No alias RNA dependent RNA polymerase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006665 sphingolipid metabolic process IEP Predicted GO
BP GO:0006672 ceramide metabolic process IEP Predicted GO
BP GO:0007031 peroxisome organization IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016972 thiol oxidase activity IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0034975 protein folding in endoplasmic reticulum IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007855 RNA-dep_RNA_pol_euk-typ 379 938
No external refs found!