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  5. Sobic.004G256600.1

Sobic.004G256600.1


Description : STAR-type post-transcriptionally regulatory factor


Gene families : OG_42_0000701 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000701_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G256600.1
Cluster HCAA Clusters: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
A4A49_39308 No alias kh domain-containing protein 0.04 Orthogroups_2024-Update
Seita.9G038800.1 No alias STAR-type post-transcriptionally regulatory factor 0.04 Orthogroups_2024-Update
Solyc01g103410 No alias KH domain-containing protein (AHRD V3.3 *** W9R1Z3_9ROSA) 0.02 Orthogroups_2024-Update
Sopen01g045760 No alias hypothetical protein 0.05 Orthogroups_2024-Update
Sopen07g034250 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR032377 STAR_dimer 35 76
No external refs found!