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  5. Sobic.004G257100.1

Sobic.004G257100.1


Description : Unknown function


Gene families : OG_42_0000405 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000405_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G257100.1
Cluster HCAA Clusters: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
At1g55130 No alias Transmembrane 9 superfamily member 6... 0.02 Orthogroups_2024-Update
Cre10.g439850 No alias transmembrane nine 7 0.02 Orthogroups_2024-Update
Cre12.g494350 No alias Endomembrane protein 70 protein family 0.02 Orthogroups_2024-Update
GRMZM2G046005 No alias Endomembrane protein 70 protein family 0.03 Orthogroups_2024-Update
GRMZM2G180575 No alias Endomembrane protein 70 protein family 0.04 Orthogroups_2024-Update
Glyma.04G060700 No alias Endomembrane protein 70 protein family 0.02 Orthogroups_2024-Update
Glyma.08G193400 No alias transmembrane nine 7 0.03 Orthogroups_2024-Update
MA_177756g0010 No alias (at3g13772 : 936.0) Encodes an Arabidopsis Transmembrane... 0.02 Orthogroups_2024-Update
Pp1s137_209V6 No alias endosomal p24a protein 0.03 Orthogroups_2024-Update
Pp1s83_105V6 No alias endosomal p24a protein 0.03 Orthogroups_2024-Update
Seita.1G352400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.6G246900.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004560 alpha-L-fucosidase activity IEP Predicted GO
MF GO:0004615 phosphomannomutase activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0009225 nucleotide-sugar metabolic process IEP Predicted GO
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Predicted GO
BP GO:0009298 GDP-mannose biosynthetic process IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0015928 fucosidase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
BP GO:0019673 GDP-mannose metabolic process IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR004240 EMP70 55 605
No external refs found!