1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.004G261400.1

Sobic.004G261400.1


Description : Prgrammed Cell Death cysteine protease *(XCP) & EC_3.4 hydrolase acting on peptide bond (peptidase) & C1-class subclass RD21/XCP thiol protease


Gene families : OG_42_0000382 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000382_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G261400.1
Cluster HCAA Clusters: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Brara.A00297.1 No alias C1-class subclass RD21/XCP thiol protease & Prgrammed... 0.02 Orthogroups_2024-Update
GRMZM2G006377 No alias xylem bark cysteine peptidase 3 0.02 Orthogroups_2024-Update
Seita.1G295700.1 No alias Prgrammed Cell Death cysteine protease *(XCP) & EC_3.4... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA 16Dec
MF GO:0008234 cysteine-type peptidase activity IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
InterPro domains Description Start Stop
IPR000668 Peptidase_C1A_C 133 348
IPR013201 Prot_inhib_I29 45 101
No external refs found!