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  5. Sobic.004G271800.1

Sobic.004G271800.1


Description : WRKY-type transcription factor


Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G271800.1
Cluster HCAA Clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
A4A49_03410 No alias putative wrky transcription factor 9 0.01 Orthogroups_2024-Update
Bradi1g08106 No alias WRKY DNA-binding protein 57 0.03 Orthogroups_2024-Update
Bradi1g51030 No alias WRKY DNA-binding protein 72 0.03 Orthogroups_2024-Update
Brara.C01290.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Brara.E00945.1 No alias WRKY-type transcription factor 0.01 Orthogroups_2024-Update
Brara.I01466.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I02789.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Brara.K00397.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G052671 No alias WRKY DNA-binding protein 2 0.02 Orthogroups_2024-Update
Glyma.09G244000 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
LOC_Os02g16540 No alias WRKY39, expressed 0.01 Orthogroups_2024-Update
LOC_Os05g39720 No alias WRKY70, expressed 0.02 Orthogroups_2024-Update
PSME_00035159-RA No alias (at1g29860 : 115.0) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
Potri.002G221600 No alias zinc-dependent activator protein-1 0.04 Orthogroups_2024-Update
Potri.004G007500 No alias WRKY family transcription factor 0.01 Orthogroups_2024-Update
Potri.013G090300 No alias WRKY DNA-binding protein 70 0.03 Orthogroups_2024-Update
Potri.014G090300 No alias WRKY family transcription factor 0.02 Orthogroups_2024-Update
Potri.015G064100 No alias WRKY DNA-binding protein 72 0.03 Orthogroups_2024-Update
Potri.016G137900 No alias WRKY DNA-binding protein 70 0.01 Orthogroups_2024-Update
Pp1s115_10V6 No alias wrky transcription 0.01 Orthogroups_2024-Update
Pp1s235_126V6 No alias wrky11 - superfamily of tfs having wrky and zinc finger domains 0.04 Orthogroups_2024-Update
Seita.1G255500.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Seita.6G198600.1 No alias WRKY-type transcription factor 0.01 Orthogroups_2024-Update
Seita.7G301900.1 No alias WRKY-type transcription factor 0.01 Orthogroups_2024-Update
Seita.8G123100.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Seita.8G187900.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G381300.1 No alias WRKY-type transcription factor 0.01 Orthogroups_2024-Update
Sobic.003G037400.1 No alias WRKY-type transcription factor 0.01 Orthogroups_2024-Update
Solyc07g047960 No alias WRKY transcription factor 1 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
MF GO:0043565 sequence-specific DNA binding IEA 16Dec
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003657 WRKY_dom 233 290
No external refs found!