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  5. Sobic.004G280200.1

Sobic.004G280200.1


Description : tobamovirus multiplication replication host factor *(TOM1)


Gene families : OG_42_0000984 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000984_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G280200.1
Cluster HCAA Clusters: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G055462 No alias tobamovirus multiplication protein 3 0.02 Orthogroups_2024-Update
Glyma.02G160700 No alias tobamovirus multiplication protein 3 0.04 Orthogroups_2024-Update
LOC_Os07g01250 No alias tobamovirus multiplication protein, putative, expressed 0.02 Orthogroups_2024-Update
Pp1s295_30V6 No alias virion binding 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
InterPro domains Description Start Stop
IPR009457 DUF1084 12 282
No external refs found!