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  5. Sobic.004G283300.1

Sobic.004G283300.1


Description : Unknown function


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G283300.1
Cluster HCAA Clusters: Cluster_424

Target Alias Description ECC score Gene Family Method Actions
A4A49_21979 No alias ethylene-responsive transcription factor erf034 0.02 Orthogroups_2024-Update
A4A49_34891 No alias dehydration-responsive element-binding protein 3 0.02 Orthogroups_2024-Update
At1g22190 No alias Ethylene-responsive transcription factor RAP2-13... 0.01 Orthogroups_2024-Update
At1g71130 No alias Ethylene-responsive transcription factor ERF070... 0.05 Orthogroups_2024-Update
At2g40220 No alias Ethylene-responsive transcription factor ABI4... 0.02 Orthogroups_2024-Update
At3g23220 No alias Ethylene-responsive transcription factor ERF095... 0.01 Orthogroups_2024-Update
Bradi3g56801 No alias Integrase-type DNA-binding superfamily protein 0.01 Orthogroups_2024-Update
Brara.A00159.1 No alias subgroup ERF-II-DEAR transcription factor 0.01 Orthogroups_2024-Update
Brara.C02660.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.01 Orthogroups_2024-Update
Brara.E00876.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Brara.G02121.1 No alias subgroup ERF-I transcription factor 0.01 Orthogroups_2024-Update
Brara.I02948.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Glyma.20G197000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G026940.1 No alias subgroup ERF-II-DEAR transcription factor 0.02 Orthogroups_2024-Update
LOC_Os04g55520 No alias AP2 domain containing protein, expressed 0.01 Orthogroups_2024-Update
PSME_00000850-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00040934-RA No alias (at5g64750 : 100.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00050761-RA No alias (at1g15360 : 129.0) Encodes a member of the ERF... 0.02 Orthogroups_2024-Update
PSME_00054473-RA No alias (at5g64750 : 103.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
Potri.002G039000 No alias ethylene response factor 1 0.03 Orthogroups_2024-Update
Pp1s38_257V6 No alias ap2 erf domain-containing transcription factor 0.04 Orthogroups_2024-Update
Pp1s90_184V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.1G342700.1 No alias subgroup ERF-VII transcription factor & transcription... 0.01 Orthogroups_2024-Update
Seita.2G138400.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Seita.9G323300.1 No alias subgroup ERF-III transcription factor 0.01 Orthogroups_2024-Update
Sobic.001G481400.1 No alias transcription factor component *(HRE/RAP2.12) of... 0.02 Orthogroups_2024-Update
Sobic.010G089700.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Solyc05g052040 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 98 145
No external refs found!