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  5. Sobic.004G288300.1

Sobic.004G288300.1


Description : nucleobase cation transporter *(PLUTO)


Gene families : OG_42_0005761 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005761_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G288300.1
Cluster HCAA Clusters: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G362848 No alias permease, cytosine/purines, uracil, thiamine, allantoin... 0.03 Orthogroups_2024-Update
HORVU6Hr1G064220.1 No alias nucleobase cation transporter *(PLUTO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
MF GO:0022857 transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004019 adenylosuccinate synthase activity IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006553 lysine metabolic process IEP Predicted GO
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001248 Pur-cyt_permease 74 519
No external refs found!