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Description : GRAS-type transcription factor
Gene families : OG_42_0001551 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001551_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor: Sobic.004G290800.1 | |
| Cluster | HCAA Clusters: Cluster_143 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At4g00150 | No alias | Scarecrow-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:O81316] | 0.04 | Orthogroups_2024-Update | |
| GRMZM2G037792 | No alias | GRAS family transcription factor | 0.03 | Orthogroups_2024-Update | |
| GRMZM5G825321 | No alias | GRAS family transcription factor | 0.04 | Orthogroups_2024-Update | |
| HORVU6Hr1G063650.1 | No alias | GRAS-type transcription factor | 0.03 | Orthogroups_2024-Update | |
| Potri.001G122800 | No alias | GRAS family transcription factor | 0.03 | Orthogroups_2024-Update | |
| Seita.4G003600.1 | No alias | GRAS-type transcription factor | 0.03 | Orthogroups_2024-Update | |
| Sopen08g027270 | No alias | GRAS domain family | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000782 | telomere cap complex | IEP | Predicted GO |
| CC | GO:0000783 | nuclear telomere cap complex | IEP | Predicted GO |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
| MF | GO:0003774 | motor activity | IEP | Predicted GO |
| MF | GO:0005384 | manganese ion transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0006873 | cellular ion homeostasis | IEP | Predicted GO |
| BP | GO:0006875 | cellular metal ion homeostasis | IEP | Predicted GO |
| BP | GO:0016073 | snRNA metabolic process | IEP | Predicted GO |
| BP | GO:0016180 | snRNA processing | IEP | Predicted GO |
| CC | GO:0016459 | myosin complex | IEP | Predicted GO |
| BP | GO:0019725 | cellular homeostasis | IEP | Predicted GO |
| BP | GO:0030003 | cellular cation homeostasis | IEP | Predicted GO |
| BP | GO:0030026 | cellular manganese ion homeostasis | IEP | Predicted GO |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Predicted GO |
| MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | Predicted GO |
| BP | GO:0034472 | snRNA 3'-end processing | IEP | Predicted GO |
| BP | GO:0034477 | U6 snRNA 3'-end processing | IEP | Predicted GO |
| BP | GO:0043628 | ncRNA 3'-end processing | IEP | Predicted GO |
| CC | GO:0044454 | nuclear chromosome part | IEP | Predicted GO |
| BP | GO:0046916 | cellular transition metal ion homeostasis | IEP | Predicted GO |
| BP | GO:0048878 | chemical homeostasis | IEP | Predicted GO |
| BP | GO:0050801 | ion homeostasis | IEP | Predicted GO |
| BP | GO:0055065 | metal ion homeostasis | IEP | Predicted GO |
| BP | GO:0055071 | manganese ion homeostasis | IEP | Predicted GO |
| BP | GO:0055076 | transition metal ion homeostasis | IEP | Predicted GO |
| BP | GO:0055080 | cation homeostasis | IEP | Predicted GO |
| BP | GO:0055082 | cellular chemical homeostasis | IEP | Predicted GO |
| BP | GO:0098771 | inorganic ion homeostasis | IEP | Predicted GO |
| MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Predicted GO |
| CC | GO:1990879 | CST complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005202 | TF_GRAS | 358 | 715 |
| No external refs found! |