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  5. Sobic.004G295100.1

Sobic.004G295100.1


Description : tonoplast intrinsic protein *(TIP)


Gene families : OG_42_0000183 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G295100.1
Cluster HCAA Clusters: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
A4A49_04270 No alias aquaporin tip4-1 0.03 Orthogroups_2024-Update
At3g26520 No alias Aquaporin TIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q41963] 0.04 Orthogroups_2024-Update
LOC_Os01g74450 No alias aquaporin protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os02g44080 No alias aquaporin protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.016G098200 No alias gamma tonoplast intrinsic protein 0.03 Orthogroups_2024-Update
Sopen03g039350 No alias Major intrinsic protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000425 MIP 14 231
No external refs found!