Sobic.004G295500.1

Description : subgroup ERF-III transcription factor

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.004G295500.1
Cluster	HCAA Clusters: Cluster_221

Target	Alias	Description	ECC score	Gene Family Method
92334	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
A4A49_05036	No alias	ethylene-responsive transcription factor 3	0.03	Orthogroups_2024-Update
A4A49_16759	No alias	ethylene-responsive transcription factor erf012	0.03	Orthogroups_2024-Update
A4A49_21212	No alias	ethylene-responsive transcription factor erf008	0.03	Orthogroups_2024-Update
A4A49_24642	No alias	ethylene-responsive transcription factor rap2-11	0.03	Orthogroups_2024-Update
A4A49_28228	No alias	ethylene-responsive transcription factor erf017	0.03	Orthogroups_2024-Update
A4A49_30015	No alias	ethylene-responsive transcription factor erf019	0.04	Orthogroups_2024-Update
A4A49_35180	No alias	ethylene-responsive transcription factor 1b	0.03	Orthogroups_2024-Update
A4A49_42088	No alias	ethylene-responsive transcription factor 13	0.03	Orthogroups_2024-Update
A4A49_42290	No alias	ethylene-responsive transcription factor rap2-4	0.03	Orthogroups_2024-Update
AC206951.3_FG016	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
AC209257.4_FG006	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
At2g36450	No alias	Ethylene-responsive transcription factor ERF024...	0.03	Orthogroups_2024-Update
At2g40350	No alias	Integrase-type DNA-binding superfamily protein...	0.03	Orthogroups_2024-Update
At4g36900	No alias	Ethylene-responsive transcription factor RAP2-10...	0.04	Orthogroups_2024-Update
Bradi1g72457	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi2g11890	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi2g56145	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi3g49810	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Bradi3g50620	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Bradi4g29010	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Brara.A01769.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Brara.A01788.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Brara.A02664.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Brara.B02302.1	No alias	subgroup ERF-I transcription factor	0.04	Orthogroups_2024-Update
Brara.B03207.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.04	Orthogroups_2024-Update
Brara.G03053.1	No alias	subgroup ERF-II transcription factor *(ERF19/20)	0.02	Orthogroups_2024-Update
Brara.H01292.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.H01777.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Brara.I03288.1	No alias	subgroup ERF-II transcription factor *(ERF19/20)	0.03	Orthogroups_2024-Update
Brara.I03979.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Brara.J02528.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.K00687.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
GRMZM2G039870	No alias	related to AP2 4	0.02	Orthogroups_2024-Update
GRMZM2G055204	No alias	related to AP2 4	0.03	Orthogroups_2024-Update
GRMZM2G137341	No alias	C-repeat/DRE binding factor 2	0.03	Orthogroups_2024-Update
GRMZM2G138396	No alias	redox responsive transcription factor 1	0.02	Orthogroups_2024-Update
GRMZM2G175543	No alias	ethylene responsive element binding factor 4	0.03	Orthogroups_2024-Update
GRMZM2G380377	No alias	dehydration response element B1A	0.02	Orthogroups_2024-Update
GRMZM5G846057	No alias	related to AP2 4	0.03	Orthogroups_2024-Update
Glyma.05G063600	No alias	ethylene responsive element binding factor 1	0.04	Orthogroups_2024-Update
Glyma.08G216600	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Glyma.09G233800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.09G242600	No alias	ethylene-responsive element binding factor 13	0.03	Orthogroups_2024-Update
Glyma.10G099800	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.10G118900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.11G014800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.13G081600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.15G077000	No alias	ERF domain protein 12	0.04	Orthogroups_2024-Update
Glyma.15G077100	No alias	erf domain protein 9	0.03	Orthogroups_2024-Update
Glyma.15G079100	No alias	ethylene responsive element binding factor 2	0.03	Orthogroups_2024-Update
Glyma.16G012600	No alias	related to AP2 2	0.04	Orthogroups_2024-Update
Glyma.18G206600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.19G026000	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
HORVU1Hr1G082310.1	No alias	subgroup ERF-X transcription factor	0.04	Orthogroups_2024-Update
HORVU6Hr1G060140.1	No alias	subgroup ERF-I transcription factor	0.05	Orthogroups_2024-Update
HORVU6Hr1G062380.3	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
HORVU6Hr1G074970.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
HORVU7Hr1G037180.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
LOC_Os03g08500	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os03g09170	No alias	ethylene-responsive transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g03670	No alias	dehydration-responsive element-binding protein,...	0.02	Orthogroups_2024-Update
LOC_Os06g07030	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g09717	No alias	ethylene-responsive transcription factor, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g09810	No alias	ethylene-responsive transcription factor, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g10780	No alias	AP2 domain containing protein, expressed	0.04	Orthogroups_2024-Update
LOC_Os08g31580	No alias	ethylene-responsive transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g39850	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_10430769g0010	No alias	(at5g25810 : 105.0) encodes a member of the DREB...	0.05	Orthogroups_2024-Update
MA_115348g0020	No alias	(at4g17500 : 116.0) Encodes a member of the ERF...	0.03	Orthogroups_2024-Update
MA_166248g0010	No alias	(at4g17500 : 138.0) Encodes a member of the ERF...	0.02	Orthogroups_2024-Update
MA_184464g0010	No alias	(at4g17500 : 88.2) Encodes a member of the ERF (ethylene...	0.05	Orthogroups_2024-Update
MA_426919g0010	No alias	(at1g19210 : 109.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_5805979g0010	No alias	(at4g17500 : 88.2) Encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
MA_65190g0010	No alias	(at5g19790 : 91.3) encodes a member of the ERF (ethylene...	0.04	Orthogroups_2024-Update
MA_7166g0010	No alias	(at3g60490 : 102.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_891091g0010	No alias	(at4g17500 : 92.0) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
MA_896002g0010	No alias	(at5g11590 : 147.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00005184-RA	No alias	(q40479\|erf2_tobac : 141.0) Ethylene-responsive...	0.02	Orthogroups_2024-Update
PSME_00037533-RA	No alias	(at5g61890 : 108.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00046052-RA	No alias	(at1g19210 : 89.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00050134-RA	No alias	(at5g19790 : 92.0) encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
PSME_00051454-RA	No alias	(at1g19210 : 98.6) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00057236-RA	No alias	(at5g11590 : 147.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
Potri.002G085600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.003G079300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.003G161000	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.005G140900	No alias	DREB and EAR motif protein 2	0.02	Orthogroups_2024-Update
Potri.007G138100	No alias	erf domain protein 9	0.02	Orthogroups_2024-Update
Potri.008G071100	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.013G135600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.014G099900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.018G028000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Seita.1G196400.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Seita.1G248300.1	No alias	subgroup ERF-I transcription factor	0.04	Orthogroups_2024-Update
Seita.1G323500.1	No alias	subgroup ERF-I transcription factor	0.05	Orthogroups_2024-Update
Seita.1G341100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.2G215500.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.04	Orthogroups_2024-Update
Seita.3G281000.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.04	Orthogroups_2024-Update
Seita.7G081300.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Seita.7G205200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.7G232100.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Seita.9G455400.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.001G169400.2	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.04	Orthogroups_2024-Update
Sobic.002G269100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.004G283201.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.004G308900.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.006G184700.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G184800.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.007G077200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.007G156700.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Sobic.008G145000.2	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.04	Orthogroups_2024-Update
Sobic.009G101400.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Sobic.010G016500.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Solyc03g123500	No alias	GCC box binding protein C.4	0.04	Orthogroups_2024-Update
Solyc07g054220	No alias	Ethylene-responsive transcription factor ERF053 (AHRD...	0.03	Orthogroups_2024-Update
Solyc09g066360	No alias	Ethylene Response Factor C.3	0.03	Orthogroups_2024-Update
Solyc12g056980	No alias	Ethylene-responsive element binding-factor (AHRD V3.3...	0.03	Orthogroups_2024-Update
Sopen04g032240	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen05g005260	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen06g022520	No alias	AP2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Predicted GO
MF	GO:0003824	catalytic activity	IEP	Predicted GO
MF	GO:0003872	6-phosphofructokinase activity	IEP	Predicted GO
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
MF	GO:0004560	alpha-L-fucosidase activity	IEP	Predicted GO
MF	GO:0004650	polygalacturonase activity	IEP	Predicted GO
BP	GO:0005975	carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0006082	organic acid metabolic process	IEP	Predicted GO
BP	GO:0006090	pyruvate metabolic process	IEP	Predicted GO
BP	GO:0006096	glycolytic process	IEP	Predicted GO
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	Predicted GO
BP	GO:0006757	ATP generation from ADP	IEP	Predicted GO
BP	GO:0008152	metabolic process	IEP	Predicted GO
MF	GO:0008443	phosphofructokinase activity	IEP	Predicted GO
BP	GO:0009056	catabolic process	IEP	Predicted GO
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	Predicted GO
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	Predicted GO
BP	GO:0009166	nucleotide catabolic process	IEP	Predicted GO
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	Predicted GO
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	Predicted GO
MF	GO:0015928	fucosidase activity	IEP	Predicted GO
BP	GO:0016052	carbohydrate catabolic process	IEP	Predicted GO
MF	GO:0016160	amylase activity	IEP	Predicted GO
MF	GO:0016161	beta-amylase activity	IEP	Predicted GO
MF	GO:0016787	hydrolase activity	IEP	Predicted GO
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predicted GO
MF	GO:0019200	carbohydrate kinase activity	IEP	Predicted GO
BP	GO:0019752	carboxylic acid metabolic process	IEP	Predicted GO
BP	GO:0042866	pyruvate biosynthetic process	IEP	Predicted GO
BP	GO:0043436	oxoacid metabolic process	IEP	Predicted GO
BP	GO:0044238	primary metabolic process	IEP	Predicted GO
BP	GO:0046031	ADP metabolic process	IEP	Predicted GO
BP	GO:0046939	nucleotide phosphorylation	IEP	Predicted GO
BP	GO:0071704	organic substance metabolic process	IEP	Predicted GO
BP	GO:1901292	nucleoside phosphate catabolic process	IEP	Predicted GO
BP	GO:1901575	organic substance catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	53	103

External Links

No external refs found!

Sobic.004G295500.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation