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  5. Sobic.004G298100.1

Sobic.004G298100.1


Description : component *(bL19c) of large plastid ribosomal-subunit proteome


Gene families : OG_42_0002220 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002220_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G298100.1
Cluster HCAA Clusters: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
A4A49_09774 No alias 50s ribosomal protein l19-1, chloroplastic 0.04 Orthogroups_2024-Update
Bradi3g50390 No alias Ribosomal protein L19 family protein 0.1 Orthogroups_2024-Update
Brara.H00935.1 No alias component *(bL19c) of large plastid ribosomal-subunit proteome 0.09 Orthogroups_2024-Update
Brara.I01980.1 No alias component *(bL19c) of large plastid ribosomal-subunit proteome 0.08 Orthogroups_2024-Update
Cre17.g734450 No alias Ribosomal protein L19 family protein 0.13 Orthogroups_2024-Update
Glyma.01G205400 No alias Ribosomal protein L19 family protein 0.08 Orthogroups_2024-Update
Glyma.11G037500 No alias Ribosomal protein L19 family protein 0.07 Orthogroups_2024-Update
HORVU6Hr1G062040.3 No alias component *(bL19c) of large plastid ribosomal-subunit proteome 0.16 Orthogroups_2024-Update
MA_947876g0010 No alias (at4g17560 : 107.0) Ribosomal protein L19 family... 0.07 Orthogroups_2024-Update
Mp3g02740.1 No alias component mtRPL19 of large ribosomal subunit proteome.... 0.04 Orthogroups_2024-Update
Potri.001G152200 No alias Ribosomal protein L19 family protein 0.1 Orthogroups_2024-Update
Seita.1G256000.1 No alias component *(bL19c) of large plastid ribosomal-subunit proteome 0.19 Orthogroups_2024-Update
Solyc08g078010 No alias Ribosomal protein L19 family protein (AHRD V3.3 *** AT4G17560.1) 0.12 Orthogroups_2024-Update
Sopen08g026520 No alias Ribosomal protein L19 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR001857 Ribosomal_L19 120 214
No external refs found!