Sobic.004G300300.1


Description : HD-ZIP I/II-type transcription factor


Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G300300.1
Cluster HCAA Clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Brara.H01761.1 No alias HD-ZIP I/II-type transcription factor 0.01 Orthogroups_2024-Update
LOC_Os07g39320 No alias homeobox domain containing protein, expressed 0.01 Orthogroups_2024-Update
PSME_00014719-RA No alias (at4g40060 : 125.0) Encodes a homeodomain leucine zipper... 0.12 Orthogroups_2024-Update
PSME_00044411-RA No alias (at1g69780 : 139.0) Encodes a homeodomain leucine zipper... 0.01 Orthogroups_2024-Update
Potri.007G135100 No alias homeobox protein 52 0.02 Orthogroups_2024-Update
Seita.2G236800.1 No alias HD-ZIP I/II-type transcription factor 0.02 Orthogroups_2024-Update
Seita.2G368600.1 No alias HD-ZIP I/II-type transcription factor 0.01 Orthogroups_2024-Update
Seita.9G503700.1 No alias HD-ZIP I/II-type transcription factor 0.01 Orthogroups_2024-Update
Sobic.002G189000.1 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
MF GO:0043565 sequence-specific DNA binding IEA 16Dec
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003106 Leu_zip_homeo 108 150
IPR001356 Homeobox_dom 52 106
No external refs found!