Sobic.004G302400.3

Description : NAC-type transcription factor

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.004G302400.3
Cluster	HCAA Clusters: Cluster_150

Target	Alias	Description	ECC score	Gene Family Method
At2g24430	No alias	NAC domain containing protein 38...	0.03	Orthogroups_2024-Update
At2g46770	No alias	NAC domain-containing protein 43...	0.03	Orthogroups_2024-Update
At3g18400	No alias	NAC domain containing protein 58...	0.03	Orthogroups_2024-Update
Bradi1g17440	No alias	Arabidopsis NAC domain containing protein 87	0.03	Orthogroups_2024-Update
Bradi3g13727	No alias	NAC (No Apical Meristem) domain transcriptional...	0.06	Orthogroups_2024-Update
Bradi3g33957	No alias	NAC domain containing protein 71	0.05	Orthogroups_2024-Update
Brara.A03159.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B00960.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B03769.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.C03560.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I00566.1	No alias	NAC-type transcription factor	0.07	Orthogroups_2024-Update
GRMZM2G018436	No alias	Arabidopsis NAC domain containing protein 87	0.04	Orthogroups_2024-Update
GRMZM2G406204	No alias	NAC domain containing protein 28	0.05	Orthogroups_2024-Update
Glyma.08G163100	No alias	NAC domain containing protein 20	0.03	Orthogroups_2024-Update
Glyma.10G197600	No alias	NAC domain containing protein 2	0.03	Orthogroups_2024-Update
LOC_Os02g42970	No alias	NAC domain containing protein, putative, expressed	0.04	Orthogroups_2024-Update
PSME_00009079-RA	No alias	(at1g65910 : 290.0) NAC domain containing protein 28...	0.03	Orthogroups_2024-Update
Potri.001G396300	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Potri.010G176600	No alias	NAC (No Apical Meristem) domain transcriptional...	0.05	Orthogroups_2024-Update
Potri.012G001400	No alias	NAC domain containing protein 100	0.03	Orthogroups_2024-Update
Solyc05g055470	No alias	NAC domain protein, (AHRD V3.3 *** A0A061FNG1_THECC)	0.03	Orthogroups_2024-Update
Solyc06g065410	No alias	NAC domain-containing protein, putative (AHRD V3.3 ***...	0.04	Orthogroups_2024-Update
Solyc10g005010	No alias	NAC domain-containing protein, putative (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006486	protein glycosylation	IEP	Predicted GO
MF	GO:0015078	proton transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015298	solute:cation antiporter activity	IEP	Predicted GO
MF	GO:0015299	solute:proton antiporter activity	IEP	Predicted GO
BP	GO:0043413	macromolecule glycosylation	IEP	Predicted GO
BP	GO:0070085	glycosylation	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	8	135

External Links

No external refs found!

Sobic.004G302400.3

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation