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  5. Sobic.004G303400.1

Sobic.004G303400.1


Description : accessory protein (LMI2) of floral meristem identity control


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G303400.1
Cluster HCAA Clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
A4A49_03021 No alias transcription factor myb48 0.02 Orthogroups_2024-Update
A4A49_34201 No alias transcription factor myb82 0.03 Orthogroups_2024-Update
A4A49_39488 No alias myb-related protein pp2 0.03 Orthogroups_2024-Update
AC217264.3_FG005 No alias myb domain protein 101 0.02 Orthogroups_2024-Update
At1g18570 No alias Transcription factor MYB51... 0.03 Orthogroups_2024-Update
At1g34670 No alias Transcription factor MYB93... 0.03 Orthogroups_2024-Update
At2g36890 No alias Duplicated homeodomain-like superfamily protein... 0.03 Orthogroups_2024-Update
At3g02940 No alias At3g02940 [Source:UniProtKB/TrEMBL;Acc:Q9LDI5] 0.03 Orthogroups_2024-Update
At3g12720 No alias AT3g12720/MBK21_8 [Source:UniProtKB/TrEMBL;Acc:Q9LTW2] 0.03 Orthogroups_2024-Update
At3g13890 No alias Transcription factor MYB26... 0.04 Orthogroups_2024-Update
At3g61250 No alias Transcription factor MYB41... 0.03 Orthogroups_2024-Update
At4g01680 No alias Myb domain protein 55 [Source:UniProtKB/TrEMBL;Acc:Q9ZSI4] 0.03 Orthogroups_2024-Update
At4g13480 No alias Myb domain protein 79 [Source:UniProtKB/TrEMBL;Acc:Q9T0G9] 0.03 Orthogroups_2024-Update
At4g17785 No alias Transcription factor MYB39... 0.03 Orthogroups_2024-Update
At5g23000 No alias Transcription factor RAX1... 0.02 Orthogroups_2024-Update
At5g49620 No alias myb domain protein 78 [Source:TAIR;Acc:AT5G49620] 0.05 Orthogroups_2024-Update
At5g57620 No alias Transcription factor MYB36... 0.03 Orthogroups_2024-Update
Bradi4g29796 No alias myb domain protein 20 0.02 Orthogroups_2024-Update
Bradi4g30220 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Bradi5g20130 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
Brara.A01176.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.03 Orthogroups_2024-Update
Brara.B01492.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.B03816.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.04 Orthogroups_2024-Update
Brara.C01184.1 No alias MYB class-R2R3 subgroup-14 transcription factor &... 0.03 Orthogroups_2024-Update
Brara.C03910.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Brara.C04622.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.D01054.1 No alias MYB class-R2R3 subgroup-15 transcription factor 0.06 Orthogroups_2024-Update
Brara.F02448.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.02 Orthogroups_2024-Update
Brara.G02266.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Brara.G02641.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Brara.I00299.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Brara.I02176.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.02 Orthogroups_2024-Update
Brara.J01962.1 No alias MYB class-R2R3 subgroup-8 transcription factor &... 0.05 Orthogroups_2024-Update
Brara.J02324.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.03 Orthogroups_2024-Update
Brara.K00319.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G003406 No alias myb domain protein 86 0.05 Orthogroups_2024-Update
GRMZM2G119693 No alias myb domain protein 61 0.03 Orthogroups_2024-Update
GRMZM2G126566 No alias myb domain protein 20 0.04 Orthogroups_2024-Update
GRMZM2G143274 No alias myb domain protein 61 0.03 Orthogroups_2024-Update
GRMZM2G176327 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
Glyma.02G005600 No alias myb domain protein 15 0.04 Orthogroups_2024-Update
Glyma.03G013300 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
Glyma.07G242600 No alias myb domain protein 111 0.03 Orthogroups_2024-Update
Glyma.10G132200 No alias myb domain protein 79 0.03 Orthogroups_2024-Update
Glyma.12G057900 No alias myb domain protein 83 0.03 Orthogroups_2024-Update
Glyma.12G199600 No alias MYB-like 102 0.02 Orthogroups_2024-Update
Glyma.14G090900 No alias myb domain protein 84 0.03 Orthogroups_2024-Update
Glyma.16G007100 No alias myb domain protein 6 0.02 Orthogroups_2024-Update
Glyma.16G007200 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
HORVU4Hr1G054420.3 No alias MYB class-R2R3 subgroup-7 transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G058580.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G058640.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os02g42870 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g18480 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g37210 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g44090 No alias myb-related protein Hv33, putative, expressed 0.02 Orthogroups_2024-Update
MA_10429682g0010 No alias (p20026|myb1_horvu : 172.0) Myb-related protein Hv1 -... 0.02 Orthogroups_2024-Update
MA_10435612g0010 No alias (at5g15310 : 300.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
MA_1201g0010 No alias (q7xbh4|myb4_orysa : 213.0) Myb-related protein Myb4... 0.02 Orthogroups_2024-Update
MA_246142g0010 No alias (at4g38620 : 256.0) Encodes a R2R3 MYB protein which is... 0.06 Orthogroups_2024-Update
PSME_00004490-RA No alias "(at2g47460 : 180.0) ""MYB12 belongs to subgroup 7 of... 0.03 Orthogroups_2024-Update
PSME_00010776-RA No alias (at1g22640 : 177.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00014669-RA No alias (at1g22640 : 190.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00017439-RA No alias (at3g13540 : 222.0) Encodes a member of the MYB family... 0.02 Orthogroups_2024-Update
PSME_00021445-RA No alias (at1g22640 : 169.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00039195-RA No alias (at5g57620 : 239.0) Encodes a putative transcription... 0.03 Orthogroups_2024-Update
PSME_00041506-RA No alias "(at2g47460 : 179.0) ""MYB12 belongs to subgroup 7 of... 0.03 Orthogroups_2024-Update
PSME_00043973-RA No alias (at1g22640 : 191.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00049306-RA No alias (at5g15310 : 258.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00050445-RA No alias (at5g40350 : 171.0) Myb24 transcription factor. Member... 0.03 Orthogroups_2024-Update
PSME_00050636-RA No alias (p20025|myb38_maize : 262.0) Myb-related protein Zm38 -... 0.03 Orthogroups_2024-Update
PSME_00051072-RA No alias (at4g34990 : 160.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00051726-RA No alias (at5g65790 : 233.0) Encodes a putative MYB transcription... 0.02 Orthogroups_2024-Update
Potri.001G005100 No alias myb domain protein 5 0.04 Orthogroups_2024-Update
Potri.001G099800 No alias myb domain protein 103 0.02 Orthogroups_2024-Update
Potri.001G258700 No alias myb domain protein 46 0.03 Orthogroups_2024-Update
Potri.001G408700 No alias MYB-like 102 0.03 Orthogroups_2024-Update
Potri.005G164900 No alias myb domain protein 93 0.04 Orthogroups_2024-Update
Potri.008G128500 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Potri.009G007100 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
Potri.011G167600 No alias myb domain protein 103 0.02 Orthogroups_2024-Update
Potri.014G111200 No alias myb domain protein 55 0.03 Orthogroups_2024-Update
Potri.015G046200 No alias myb domain protein 116 0.03 Orthogroups_2024-Update
Potri.019G036400 No alias myb domain protein 5 0.02 Orthogroups_2024-Update
Potri.019G118900 No alias myb domain protein 63 0.02 Orthogroups_2024-Update
Potri.T011400 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Pp1s257_83V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.04 Orthogroups_2024-Update
Pp1s61_196V6 No alias myb transcription factor myb92 0.03 Orthogroups_2024-Update
Seita.1G209100.1 No alias MYB class-R2R3 subgroup-8 transcription factor 0.03 Orthogroups_2024-Update
Seita.2G351400.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.03 Orthogroups_2024-Update
Seita.3G232500.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.04 Orthogroups_2024-Update
Seita.7G161400.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Seita.9G204400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G142300.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G373000.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.04 Orthogroups_2024-Update
Sobic.004G219800.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Sobic.005G217200.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G148000.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Sobic.007G132600.1 No alias MYB class-R2R3 transcription factor 0.05 Orthogroups_2024-Update
Solyc02g067340 No alias R2R3MYB transcription factor 96 0.04 Orthogroups_2024-Update
Solyc03g005570 No alias MYB family protein (AHRD V3.3 *** A0A067KW19_JATCU) 0.03 Orthogroups_2024-Update
Solyc07g008010 No alias R2R3MYB transcription factor 82 0.03 Orthogroups_2024-Update
Solyc12g099130 No alias R2R3MYB transcription factor 108 0.03 Orthogroups_2024-Update
Sopen01g038150 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen02g038370 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen05g031660 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen06g027120 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen08g019610 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen11g025590 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 15 62
IPR001005 SANT/Myb 68 113
No external refs found!