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  5. Sobic.004G309300.1

Sobic.004G309300.1


Description : EC_1.7 oxidoreductase acting on other nitrogenous compound as donor & nitrite reductase


Gene families : OG_42_0004617 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004617_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G309300.1
Cluster HCAA Clusters: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
A4A49_08299 No alias ferredoxin--nitrite reductase, chloroplastic 0.04 Orthogroups_2024-Update
GRMZM2G079381 No alias nitrite reductase 1 0.02 Orthogroups_2024-Update
LOC_Os01g25484 No alias ferredoxin--nitrite reductase, putative, expressed 0.03 Orthogroups_2024-Update
MA_142030g0010 No alias (p38500|nir_betve : 866.0) Ferredoxin--nitrite... 0.03 Orthogroups_2024-Update
Potri.004G140800 No alias nitrite reductase 1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA 16Dec
MF GO:0020037 heme binding IEA 16Dec
MF GO:0051536 iron-sulfur cluster binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006067 NO2/SO3_Rdtase_4Fe4S_dom 469 575
IPR006067 NO2/SO3_Rdtase_4Fe4S_dom 205 361
IPR005117 NiRdtase/SiRdtase_haem-b_fer 130 195
IPR005117 NiRdtase/SiRdtase_haem-b_fer 387 450
No external refs found!