Sobic.004G319700.1


Description : Unknown function


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G319700.1
Cluster HCAA Clusters: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
A4A49_03629 No alias dehydration-responsive element-binding protein 3 0.02 Orthogroups_2024-Update
A4A49_11348 No alias ethylene-responsive transcription factor erf010 0.01 Orthogroups_2024-Update
A4A49_17425 No alias dehydration-responsive element-binding protein 2a 0.04 Orthogroups_2024-Update
A4A49_24041 No alias ethylene-responsive transcription factor 1a 0.01 Orthogroups_2024-Update
A4A49_39586 No alias ethylene-responsive transcription factor erf106 0.02 Orthogroups_2024-Update
At1g12610 No alias Dehydration-responsive element-binding protein 1F... 0.05 Orthogroups_2024-Update
At1g12630 No alias Ethylene-responsive transcription factor ERF027... 0.02 Orthogroups_2024-Update
At1g28360 No alias Ethylene-responsive transcription factor 12... 0.01 Orthogroups_2024-Update
At3g23220 No alias Ethylene-responsive transcription factor ERF095... 0.01 Orthogroups_2024-Update
At3g60490 No alias Ethylene-responsive transcription factor ERF035... 0.03 Orthogroups_2024-Update
At3g61630 No alias CRF6 [Source:UniProtKB/TrEMBL;Acc:A0A178VFH2] 0.02 Orthogroups_2024-Update
At5g25190 No alias Ethylene-responsive transcription factor ERF003... 0.02 Orthogroups_2024-Update
At5g51190 No alias Ethylene-responsive transcription factor ERF105... 0.02 Orthogroups_2024-Update
Bradi1g72457 No alias Integrase-type DNA-binding superfamily protein 0.01 Orthogroups_2024-Update
Bradi4g31040 No alias related to AP2 2 0.02 Orthogroups_2024-Update
Bradi5g24110 No alias related to AP2 10 0.02 Orthogroups_2024-Update
Brara.A00041.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Brara.B02302.1 No alias subgroup ERF-I transcription factor 0.01 Orthogroups_2024-Update
Brara.B02952.1 No alias subgroup ERF-IX transcription factor 0.01 Orthogroups_2024-Update
Brara.C02660.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.02 Orthogroups_2024-Update
Brara.D00278.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.04 Orthogroups_2024-Update
Brara.E00471.1 No alias subgroup ERF-III transcription factor 0.01 Orthogroups_2024-Update
Brara.F03559.1 No alias subgroup ERF-IX transcription factor 0.01 Orthogroups_2024-Update
Brara.G02253.1 No alias subgroup ERF-II transcription factor *(ERF16/17/18) 0.02 Orthogroups_2024-Update
Brara.H01575.1 No alias transcription factor *(CBF/DREB1) & subgroup ERF-III... 0.01 Orthogroups_2024-Update
Brara.H01576.1 No alias transcription factor *(CBF/DREB1) & subgroup ERF-III... 0.01 Orthogroups_2024-Update
Brara.H01777.1 No alias subgroup ERF-I transcription factor 0.01 Orthogroups_2024-Update
Brara.I01326.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Brara.I02948.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Brara.I03346.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.J02528.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Brara.K01713.1 No alias subgroup ERF-I transcription factor 0.01 Orthogroups_2024-Update
GRMZM2G057386 No alias ethylene responsive element binding factor 5 0.06 Orthogroups_2024-Update
GRMZM2G068967 No alias ethylene response factor 7 0.06 Orthogroups_2024-Update
Glyma.02G039300 No alias DORNROSCHEN-like 0.01 Orthogroups_2024-Update
Glyma.02G294100 No alias ethylene response factor 7 0.02 Orthogroups_2024-Update
Glyma.03G116700 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.06G068800 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G114000 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Glyma.07G156200 No alias Integrase-type DNA-binding superfamily protein 0.01 Orthogroups_2024-Update
Glyma.08G137600 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G147200 No alias C-repeat-binding factor 4 0.03 Orthogroups_2024-Update
Glyma.11G199300 No alias cytokinin response factor 4 0.04 Orthogroups_2024-Update
Glyma.14G205600 No alias cytokinin response factor 4 0.05 Orthogroups_2024-Update
Glyma.17G124100 No alias related to AP2 11 0.01 Orthogroups_2024-Update
Glyma.19G142000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G055710.1 No alias subgroup ERF-IX transcription factor 0.01 Orthogroups_2024-Update
HORVU6Hr1G060140.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
HORVU7Hr1G026940.1 No alias subgroup ERF-II-DEAR transcription factor 0.02 Orthogroups_2024-Update
HORVU7Hr1G037180.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
LOC_Os02g43940 No alias AP2 domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os02g52670 No alias AP2 domain containing protein, expressed 0.01 Orthogroups_2024-Update
LOC_Os04g46440 No alias AP2 domain containing protein, expressed 0.01 Orthogroups_2024-Update
LOC_Os06g06540 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g12510 No alias AP2 domain containing protein, expressed 0.01 Orthogroups_2024-Update
LOC_Os09g20350 No alias ethylene-responsive transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10431529g0030 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
MA_26547g0010 No alias (at4g23750 : 91.7) encodes a member of the ERF (ethylene... 0.01 Orthogroups_2024-Update
MA_502153g0010 No alias (at5g44210 : 94.4) encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
MA_78784g0010 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
PSME_00004812-RA No alias (at4g23750 : 92.4) encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
PSME_00005184-RA No alias (q40479|erf2_tobac : 141.0) Ethylene-responsive... 0.02 Orthogroups_2024-Update
Potri.001G155700 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.002G141200 No alias Integrase-type DNA-binding superfamily protein 0.01 Orthogroups_2024-Update
Potri.002G201600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.003G161000 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.005G140900 No alias DREB and EAR motif protein 2 0.02 Orthogroups_2024-Update
Potri.006G069400 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G091300 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Pp1s124_33V6 No alias ap2 erf domain-containing transcription factor 0.05 Orthogroups_2024-Update
Pp1s162_92V6 No alias ap2 erf domain-containing transcription factor 0.07 Orthogroups_2024-Update
Pp1s335_8V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.1G187900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.1G341100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G176700.1 No alias subgroup ERF-I transcription factor 0.01 Orthogroups_2024-Update
Seita.8G098100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.003G442100.1 No alias subgroup ERF-III transcription factor 0.01 Orthogroups_2024-Update
Sobic.009G238500.1 No alias subgroup ERF-I transcription factor 0.05 Orthogroups_2024-Update
Solyc04g054910 No alias Ethylene-responsive element binding-factor (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc08g078190 No alias ethylene-responsive transcription factor 0.02 Orthogroups_2024-Update
Solyc12g009240 No alias Ethylene-responsive transcription factor ERF017 (AHRD... 0.02 Orthogroups_2024-Update
Solyc12g044390 No alias ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update
Solyc12g056980 No alias Ethylene-responsive element binding-factor (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen03g035520 No alias AP2 domain 0.04 Orthogroups_2024-Update
Sopen07g021830 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen07g028150 No alias AP2 domain 0.01 Orthogroups_2024-Update
Sopen08g020590 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen08g026680 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen08g026910 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 21 70
No external refs found!