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  5. Sobic.004G326600.1

Sobic.004G326600.1


Description : subunit alpha of CCT chaperonin folding complex *(CCT1)


Gene families : OG_42_0004155 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004155_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G326600.1
Cluster HCAA Clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
At3g20050 No alias T-complex protein 1 subunit alpha... 0.03 Orthogroups_2024-Update
Bradi1g49760 No alias T-complex protein 1 alpha subunit 0.07 Orthogroups_2024-Update
Bradi5g17750 No alias T-complex protein 1 alpha subunit 0.06 Orthogroups_2024-Update
Brara.A02836.1 No alias subunit alpha of CCT chaperonin folding complex *(CCT1) 0.04 Orthogroups_2024-Update
Brara.E02197.1 No alias subunit alpha of CCT chaperonin folding complex *(CCT1) 0.07 Orthogroups_2024-Update
Cre10.g439100 No alias T-complex protein 1 alpha subunit 0.04 Orthogroups_2024-Update
Glyma.05G165500 No alias T-complex protein 1 alpha subunit 0.03 Orthogroups_2024-Update
Glyma.08G123100 No alias T-complex protein 1 alpha subunit 0.03 Orthogroups_2024-Update
HORVU7Hr1G044070.2 No alias subunit alpha of CCT chaperonin folding complex *(CCT1) 0.07 Orthogroups_2024-Update
LOC_Os04g46620 No alias T-complex protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_21256g0010 No alias (at3g20050 : 567.0) Encodes a putative cytoplasmic... 0.07 Orthogroups_2024-Update
Mp7g01530.1 No alias CCT1 subunit alpha of CCT chaperonin folding complex 0.03 Orthogroups_2024-Update
PSME_00016794-RA No alias (at3g20050 : 328.0) Encodes a putative cytoplasmic... 0.05 Orthogroups_2024-Update
Potri.014G058500 No alias T-complex protein 1 alpha subunit 0.06 Orthogroups_2024-Update
Pp1s39_248V6 No alias No description available 0.02 Orthogroups_2024-Update
Pp1s97_11V6 No alias MAL21.5; T-complex protein 1 alpha subunit / TCP-1-alpha... 0.04 Orthogroups_2024-Update
Seita.4G052500.1 No alias subunit alpha of CCT chaperonin folding complex *(CCT1) 0.13 Orthogroups_2024-Update
Seita.7G190300.1 No alias subunit alpha of CCT chaperonin folding complex *(CCT1) 0.08 Orthogroups_2024-Update
Solyc01g090750 No alias T-complex protein 1 alpha subunit (AHRD V3.3 *** AT3G20050.1) 0.03 Orthogroups_2024-Update
Sopen01g036480 No alias TCP-1/cpn60 chaperonin family 0.03 Orthogroups_2024-Update
evm.model.contig_3552.5 No alias (at3g20050 : 578.0) Encodes a putative cytoplasmic... 0.01 Orthogroups_2024-Update
evm.model.tig00021350.16 No alias (at3g20050 : 727.0) Encodes a putative cytoplasmic... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006188 IMP biosynthetic process IEP Predicted GO
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Predicted GO
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016842 amidine-lyase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046040 IMP metabolic process IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 31 536
No external refs found!