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  5. Sobic.004G330200.1

Sobic.004G330200.1


Description : EC_4.3 carbon-nitrogen lyase


Gene families : OG_42_0000149 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000149_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G330200.1
Cluster HCAA Clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
110258 No alias Calcium-dependent phosphotriesterase superfamily protein 0.02 Orthogroups_2024-Update
At1g74010 No alias At1g74010 [Source:UniProtKB/TrEMBL;Acc:Q9C9C2] 0.02 Orthogroups_2024-Update
Bradi1g56532 No alias Calcium-dependent phosphotriesterase superfamily protein 0.02 Orthogroups_2024-Update
Bradi4g40305 No alias Calcium-dependent phosphotriesterase superfamily protein 0.02 Orthogroups_2024-Update
Brara.D00314.1 No alias EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
Brara.D00315.1 No alias EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
Brara.D01630.1 No alias EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
Glyma.05G016500 No alias Calcium-dependent phosphotriesterase superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os08g07810 No alias strictosidine synthase, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00005282-RA No alias (at5g22020 : 271.0) Calcium-dependent phosphotriesterase... 0.03 Orthogroups_2024-Update
Potri.017G027600 No alias Calcium-dependent phosphotriesterase superfamily protein 0.03 Orthogroups_2024-Update
Seita.1G343100.1 No alias EC_4.3 carbon-nitrogen lyase 0.03 Orthogroups_2024-Update
Seita.1G343200.1 No alias EC_4.3 carbon-nitrogen lyase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA 16Dec
MF GO:0016844 strictosidine synthase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
InterPro domains Description Start Stop
IPR018119 Strictosidine_synth_cons-reg 163 251
No external refs found!