Sobic.004G331300.2

Description : subgroup ERF-V transcription factor

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.004G331300.2
Cluster	HCAA Clusters: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
104978	No alias	Integrase-type DNA-binding superfamily protein	0.08	Orthogroups_2024-Update
A4A49_16244	No alias	ethylene-responsive transcription factor rap2-11	0.02	Orthogroups_2024-Update
A4A49_24041	No alias	ethylene-responsive transcription factor 1a	0.02	Orthogroups_2024-Update
At1g22985	No alias	CRF7 [Source:UniProtKB/TrEMBL;Acc:A0A178W874]	0.03	Orthogroups_2024-Update
At1g43160	No alias	Ethylene-responsive transcription factor RAP2-6...	0.04	Orthogroups_2024-Update
At2g22200	No alias	Ethylene-responsive transcription factor ERF056...	0.03	Orthogroups_2024-Update
At2g47520	No alias	Ethylene-responsive transcription factor ERF071...	0.03	Orthogroups_2024-Update
Bradi2g60331	No alias	C-repeat/DRE binding factor 1	0.03	Orthogroups_2024-Update
Bradi3g33355	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Brara.A02664.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Brara.C00832.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Brara.C03562.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Brara.G00520.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.H01575.1	No alias	transcription factor *(CBF/DREB1) & subgroup ERF-III...	0.02	Orthogroups_2024-Update
Brara.I04678.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Brara.J02251.1	No alias	cutin and suberin biosynthesis transcription factor...	0.03	Orthogroups_2024-Update
Brara.K01077.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Cre07.g353500	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
GRMZM2G055204	No alias	related to AP2 4	0.02	Orthogroups_2024-Update
GRMZM2G156737	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
GRMZM2G421033	No alias	DREB and EAR motif protein 3	0.02	Orthogroups_2024-Update
GRMZM2G481668	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.03G017300	No alias	related to AP2 11	0.02	Orthogroups_2024-Update
Glyma.03G112100	No alias	ethylene-responsive element binding factor 13	0.03	Orthogroups_2024-Update
Glyma.04G067200	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Glyma.07G244867	No alias	ethylene-responsive element binding protein	0.05	Orthogroups_2024-Update
Glyma.08G216600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.11G036500	No alias	ethylene responsive element binding factor 1	0.03	Orthogroups_2024-Update
Glyma.14G147500	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.14G171500	No alias	related to AP2 4	0.03	Orthogroups_2024-Update
Glyma.16G040000	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.17G124100	No alias	related to AP2 11	0.02	Orthogroups_2024-Update
Glyma.17G194100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.18G252400	No alias	ethylene-responsive element binding factor 13	0.03	Orthogroups_2024-Update
Glyma.19G262700	No alias	related to AP2 2	0.04	Orthogroups_2024-Update
HORVU4Hr1G079630.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
LOC_Os08g43210	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
Mp7g09350.1	No alias	transcription factor (ERF)	0.02	Orthogroups_2024-Update
Potri.005G168700	No alias	related to AP2 4	0.02	Orthogroups_2024-Update
Potri.010G183700	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.014G094500	No alias	cytokinin response factor 5	0.03	Orthogroups_2024-Update
Potri.018G085700	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Pp1s127_75V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s55_253V6	No alias	transcriptional factor	0.03	Orthogroups_2024-Update
Seita.1G351800.1	No alias	subgroup ERF-V transcription factor	0.04	Orthogroups_2024-Update
Seita.7G205100.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
Sobic.006G169900.1	No alias	subgroup ERF-III transcription factor	0.05	Orthogroups_2024-Update
Solyc05g052030	No alias	ethylene response factor 4	0.03	Orthogroups_2024-Update
Solyc06g068360	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.04	Orthogroups_2024-Update
Sopen03g039660	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen07g033090	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen08g030250	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen10g004890	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
BP	GO:0006260	DNA replication	IEP	Predicted GO
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Predicted GO
BP	GO:0006631	fatty acid metabolic process	IEP	Predicted GO
BP	GO:0009057	macromolecule catabolic process	IEP	Predicted GO
BP	GO:0009987	cellular process	IEP	Predicted GO
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Predicted GO
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Predicted GO
MF	GO:0030599	pectinesterase activity	IEP	Predicted GO
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Predicted GO
BP	GO:0042545	cell wall modification	IEP	Predicted GO
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Predicted GO
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Predicted GO
BP	GO:0045229	external encapsulating structure organization	IEP	Predicted GO
MF	GO:0045300	acyl-[acyl-carrier-protein] desaturase activity	IEP	Predicted GO
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Predicted GO
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Predicted GO
BP	GO:0071554	cell wall organization or biogenesis	IEP	Predicted GO
BP	GO:0071555	cell wall organization	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	7	56

External Links

No external refs found!

Sobic.004G331300.2

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation