1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.004G340632.1

Sobic.004G340632.1


Description : Unknown function


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G340632.1
Cluster HCAA Clusters: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
At1g65390 No alias Protein PHLOEM PROTEIN 2-LIKE A5... 0.03 Orthogroups_2024-Update
At5g24560 No alias phloem protein 2-B12 [Source:TAIR;Acc:AT5G24560] 0.04 Orthogroups_2024-Update
Bradi1g00970 No alias phloem protein 2-B10 0.06 Orthogroups_2024-Update
Glyma.03G253900 No alias phloem protein 2-B1 0.04 Orthogroups_2024-Update
Glyma.20G021200 No alias phloem protein 2-A1 0.03 Orthogroups_2024-Update
Glyma.20G220100 No alias phloem protein 2-B1 0.04 Orthogroups_2024-Update
HORVU6Hr1G090000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G012610.1 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00005739-RA No alias (at2g02240 : 199.0) maternal effect embryo arrest 66... 0.02 Orthogroups_2024-Update
PSME_00034035-RA No alias (at4g19850 : 81.3) encodes a protein similar to phloem... 0.04 Orthogroups_2024-Update
Potri.001G050100 No alias phloem protein 2-B1 0.02 Orthogroups_2024-Update
Seita.1G361500.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.004G341100.2 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0009891 positive regulation of biosynthetic process IEP Predicted GO
BP GO:0009893 positive regulation of metabolic process IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0009967 positive regulation of signal transduction IEP Predicted GO
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010628 positive regulation of gene expression IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0010647 positive regulation of cell communication IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
BP GO:0023056 positive regulation of signaling IEP Predicted GO
BP GO:0031325 positive regulation of cellular metabolic process IEP Predicted GO
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0048522 positive regulation of cellular process IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0048584 positive regulation of response to stimulus IEP Predicted GO
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051254 positive regulation of RNA metabolic process IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
BP GO:0080135 regulation of cellular response to stress IEP Predicted GO
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Predicted GO
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000638 regulation of SREBP signaling pathway IEP Predicted GO
BP GO:2000640 positive regulation of SREBP signaling pathway IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 11 54
IPR025886 PP2-like 121 300
No external refs found!