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  5. Sobic.004G341700.1

Sobic.004G341700.1


Description : component *(LUG/LUH) of transcriptional co-repressor complex


Gene families : OG_42_0000674 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000674_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.004G341700.1
Cluster HCAA Clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Glyma.15G075500 No alias LEUNIG_homolog 0.03 Orthogroups_2024-Update
MA_950191g0010 No alias (at4g32551 : 286.0) LEUNIG regulates floral organ... 0.04 Orthogroups_2024-Update
Sobic.003G214700.1 No alias component *(LUG/LUH) of transcriptional co-repressor complex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009439 cyanate metabolic process IEP Predicted GO
BP GO:0010024 phytochromobilin biosynthetic process IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
BP GO:0046434 organophosphate catabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Predicted GO
BP GO:0046855 inositol phosphate dephosphorylation IEP Predicted GO
MF GO:0050897 cobalt ion binding IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
BP GO:0051202 phytochromobilin metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0070037 rRNA (pseudouridine) methyltransferase activity IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
BP GO:0071545 inositol phosphate catabolic process IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006594 LisH 10 36
IPR001680 WD40_repeat 687 720
IPR001680 WD40_repeat 559 596
IPR001680 WD40_repeat 604 640
IPR001680 WD40_repeat 771 803
No external refs found!