Sobic.005G001000.1

Description : component *(NOT4) of mRNA deadenylation CCR4-NOT complex

Gene families : OG_42_0002171 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002171_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.005G001000.1
Cluster	HCAA Clusters: Cluster_167

Target	Alias	Description	ECC score	Gene Family Method	Actions
Kfl00166_0220	kfl00166_0220_v1....	(at3g45630 : 268.0) RNA binding (RRM/RBD/RNP motifs)...	0.01	Orthogroups_2024-Update
evm.model.tig00001065.17	No alias	(at5g60170 : 186.0) RNA binding (RRM/RBD/RNP motifs)...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	125	202

External Links

No external refs found!