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  5. Sobic.005G005600.2

Sobic.005G005600.2


Description : B-G-class Rab-GDF protein


Gene families : OG_42_0000375 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000375_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G005600.2
Cluster HCAA Clusters: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
Brara.C00019.1 No alias B-G-class Rab-GDF protein 0.03 Orthogroups_2024-Update
Brara.E00551.1 No alias B-G-class Rab-GDF protein 0.03 Orthogroups_2024-Update
GRMZM2G089783 No alias prenylated RAB acceptor 1.B4 0.05 Orthogroups_2024-Update
Pp1s126_63V6 No alias T3G21.15; prenylated rab acceptor (PRA1) family protein... 0.03 Orthogroups_2024-Update
Seita.5G139000.1 No alias B-G-class Rab-GDF protein 0.03 Orthogroups_2024-Update
Seita.7G330500.1 No alias B-G-class Rab-GDF protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 57 199
No external refs found!