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  5. Sobic.005G005800.1

Sobic.005G005800.1


Description : EC_1.10 oxidoreductase acting on diphenol or related substance as donor


Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.005G005800.1
Cluster HCAA Clusters: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
105894 No alias laccase 17 0.02 Orthogroups_2024-Update
At5g07130 No alias Laccase-13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYQ2] 0.02 Orthogroups_2024-Update
Bradi1g65100 No alias laccase 5 0.03 Orthogroups_2024-Update
Bradi2g23350 No alias laccase 17 0.01 Orthogroups_2024-Update
Bradi2g53800 No alias laccase 12 0.02 Orthogroups_2024-Update
Brara.J01366.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
Glyma.03G073778 No alias laccase 7 0.02 Orthogroups_2024-Update
Glyma.14G198900 No alias laccase 3 0.02 Orthogroups_2024-Update
HORVU3Hr1G086160.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
LOC_Os03g16610 No alias laccase precursor protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g38420 No alias laccase precursor protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g15680 No alias laccase precursor protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00001502-RA No alias (at2g38080 : 615.0) Encodes a protein with similarity to... 0.03 Orthogroups_2024-Update
PSME_00024478-RA No alias (at5g05390 : 702.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00028638-RA No alias (at5g05390 : 656.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00028664-RA No alias (at5g05390 : 686.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00031239-RA No alias (at1g18140 : 634.0) putative laccase, a member of... 0.04 Orthogroups_2024-Update
PSME_00042485-RA No alias (at5g05390 : 782.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00044158-RA No alias (at2g40370 : 673.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00044448-RA No alias (at5g05390 : 808.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
Potri.001G054600 No alias laccase 17 0.03 Orthogroups_2024-Update
Potri.005G200700 No alias laccase 14 0.03 Orthogroups_2024-Update
Potri.006G087100 No alias laccase 17 0.02 Orthogroups_2024-Update
Potri.007G023300 No alias laccase 11 0.02 Orthogroups_2024-Update
Potri.009G102700 No alias laccase 11 0.03 Orthogroups_2024-Update
Seita.1G320600.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.02 Orthogroups_2024-Update
Seita.5G238100.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.02 Orthogroups_2024-Update
Seita.5G377700.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.02 Orthogroups_2024-Update
Seita.5G457800.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
Sobic.009G162800.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
Solyc10g085090 No alias Laccase (AHRD V3.3 *** P93366_TOBAC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA 16Dec
MF GO:0016491 oxidoreductase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR001117 Cu-oxidase 178 326
IPR011706 Cu-oxidase_2 436 569
IPR011707 Cu-oxidase_3 47 161
No external refs found!